RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TTC17Q96AE7 1141 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 POPDC2Q9HBU9 364 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 NCKAP1Q9Y2A7 1128 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 LAMA1P25391 3075 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 E5RJQ4 531 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 HYAL3O43820 417 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SH3BP5O60239 455 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 GJB3O75712 270 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 LUC7L3O95232 432 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SEMA4FO95754 770 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 TOP3BO95985 862 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 ACSL1P33121 698 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 MATKP42679 507 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 AFF3P51826 1226 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 UBE2HP62256 183 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 RPS14P62263 151 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 RPS24P62847 133 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 TRIP6Q15654 476 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SYPL2Q5VXT5 272 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 GBP6Q6ZN66 633 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 TMEM110Q86TL2 294 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 TAC4Q86UU9 113 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 LGI2Q8N0V4 545 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 KDM1BQ8NB78 822 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 GANCQ8TET4 914 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC39A13Q96H72 371 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 BTN2A3PQ96KV6 586 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 PRICKLE1Q96MT3 831 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 CRACR2AQ9BSW2 395 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 NUCKS1Q9H1E3 243 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 CEP83Q9Y592 693 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 CACNA1EQ15878 2313 aa12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
NUDCD3-211ENST00000497978 F5H5T6 163 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 TRUB2O95900 331 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 SRPRAP08240 638 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 ZNF883P0CG24 379 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC2A3P11169 496 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 CSKP41240 450 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 SNX16P57768 344 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 FAM193AP78312 1265 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 PDCLQ13371 301 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 CAMK4Q16566 473 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 ARHGAP44Q17R89 818 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 EXOC3L4Q17RC7 722 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 DCAF6Q58WW2 860 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 ZC3H12AQ5D1E8 599 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 PITRM1Q5JRX3 1037 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 RAP1GAP2Q684P5 730 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 CFAP52Q8N1V2 620 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 ATP6V0D2Q8N8Y2 350 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 SETD7Q8WTS6 366 aaKnown RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 RNF34Q969K3 372 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 LMLNQ96KR4 655 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 NOX5Q96PH1 765 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 RSPH9Q9H1X1 276 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 MSRB2Q9Y3D2 182 aa12.17□□□□□ -0.46
NUDCD3-211ENST00000497978 KMT2BQ9UMN6 2715 aaPredicted RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 A0A1B0GVT2 93 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 TARSL2A2RTX5 802 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 FSBPO95073 299 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 GLI1P08151 1106 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 SLC9A1P19634 815 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ABCB4P21439 1286 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 TACR2P21452 398 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 NNMTP40261 264 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 MTIF2P46199 727 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 CDK17Q00537 523 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 PTK2Q05397 1052 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 MTA1Q13330 715 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
NUDCD3-211ENST00000497978 SUZ12Q15022 739 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms