RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-209	ENST00000497871	BMP6	P22004	513 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	GRIA4	P48058	902 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	RPS24	P62847	133 aa	Known RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	ARID5B	Q14865	1188 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	MS4A13	Q5J8X5	152 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	TRIM59	Q8IWR1	403 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	BAHD1	Q8TBE0	780 aa	Predicted RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	STK32A	Q8WU08	396 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	KREMEN1	Q96MU8	473 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	TRIM62	Q9BVG3	475 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	ST7	Q9NRC1	585 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	INTS6	Q9UL03	887 aa	Known RBP	18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	ANKRD6	Q9Y2G4	727 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	SNX11	Q9Y5W9	270 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	KNL1	Q8NG31	2342 aa		18.9	■□□□□ 0.62
ATPAF2-209	ENST00000497871	TAF4	O00268	1085 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	RNASEH1	O60930	286 aa	Known RBP	18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CSK	P41240	450 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MARS	P56192	900 aa	Known RBP	18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CDH18	Q13634	790 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MORC3	Q14149	939 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	BECN1	Q14457	450 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MEA1	Q16626	185 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DCAF6	Q58WW2	860 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PROSER1	Q86XN7	944 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CARNMT1	Q8N4J0	409 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	FAM149B1	Q96BN6	582 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MYEOV	Q96EZ4	313 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MRGPRX3	Q96LB0	322 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PABPC3	Q9H361	631 aa	Known RBP	18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MTG2	Q9H4K7	406 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	FBXL12	Q9NXK8	326 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SPEG	Q15772	3267 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PKD1L2	Q7Z442	2459 aa		18.89	■□□□□ 0.61
ATPAF2-209	ENST00000497871	TARSL2	A2RTX5	802 aa	Known RBP	18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CAPN9	O14815	690 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SIN3B	O75182	1162 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	AFP	P02771	609 aa	Known RBP	18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SRPRA	P08240	638 aa	Known RBP	18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SCAP	Q12770	1279 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	FSCB	Q5H9T9	825 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SYPL2	Q5VXT5	272 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	TMEM110	Q86TL2	294 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CFAP52	Q8N1V2	620 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ADAM32	Q8TC27	787 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	GANC	Q8TET4	914 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	IGSF8	Q969P0	613 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SLC4A5	Q9BY07	1137 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	NUCKS1	Q9H1E3	243 aa	Known RBP	18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ERVW-1	Q9UQF0	538 aa		18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DMXL2	Q8TDJ6	3036 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MED7	O43513	233 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DKK1	O94907	266 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	LUC7L3	O95232	432 aa	Known RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MOCS3	O95396	460 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	KRT5	P13647	590 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	YWHAZ	P63104	245 aa	Known RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	NUMA1	Q14980	2115 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PITRM1	Q5JRX3	1037 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	C9orf64	Q5T6V5	341 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	KIAA0895L	Q68EN5	471 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DENND1B	Q6P3S1	775 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	TAC4	Q86UU9	113 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DHX40	Q8IX18	779 aa	Known RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ZNF606	Q8WXB4	792 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MED15	Q96RN5	788 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ORAI3	Q9BRQ5	295 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	SRRT	Q9BXP5	876 aa	Known RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	INTS2	Q9H0H0	1204 aa	Known RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	UBE2T	Q9NPD8	197 aa	Predicted RBP	18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	TOR4A	Q9NXH8	423 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CTNND2	Q9UQB3	1225 aa		18.87	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CACNA1G	O43497	2377 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	KCNK3	O14649	394 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PAPSS1	O43252	624 aa	Predicted RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	PCDHGA12	O60330	932 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	DFNA5	O60443	496 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	LETM1	O95202	739 aa	Predicted RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MOCS2	O96007	188 aa	Predicted RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	APOE	P02649	317 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	IGHV4-34	P06331	123 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ATXN1L	P0C7T5	689 aa	Known RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CTSK	P43235	329 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	GALC	P54803	685 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	STX17	P56962	302 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	RACK1	P63244	317 aa	Known RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ECT2L	Q008S8	904 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	CST6	Q15828	149 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	LRSAM1	Q6UWE0	723 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	MMS22L	Q6ZRQ5	1243 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ENOSF1	Q7L5Y1	443 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	TMPRSS7	Q7RTY8	843 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	ADAT2	Q7Z6V5	191 aa	Known RBP	18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	BTN2A3P	Q96KV6	586 aa		18.86	■□□□□ 0.61
ATPAF2-209	ENST00000497871	NEUROG2	Q9H2A3	272 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms