RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FAM72BQ86X60 149 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 MIB1Q86YT6 1006 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 ACTL9Q8TC94 416 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 C1orf54Q8WWF1 131 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 MRPS31Q92665 395 aaKnown RBP14.64□□□□□ -0.07
VPS26A-209ENST00000497564 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 KLF16Q9BXK1 252 aaPredicted RBP14.64□□□□□ -0.07
VPS26A-209ENST00000497564 AMACRQ9UHK6 382 aa14.64□□□□□ -0.07
VPS26A-209ENST00000497564 MYO18AQ92614 2054 aaKnown RBP14.64□□□□□ -0.07
VPS26A-209ENST00000497564 C2orf78A6NCI8 922 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 DCLK1O15075 740 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 CREB3O43889 395 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 LRIG2O94898 1065 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 ITGAVP06756 1048 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 RHOXF2BP0C7M4 288 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 COL9A1P20849 921 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 GBP2P32456 591 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 VCPP55072 806 aaKnown RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 DYNLT1P63172 113 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 DR1Q01658 176 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 OTUD4Q01804 1114 aaKnown RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 LMNB2Q03252 620 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 BYSLQ13895 437 aaKnown RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 PAFAH1B3Q15102 231 aaKnown RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 WDR93Q6P2C0 686 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 POTEHQ6S545 545 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 TRIM67Q6ZTA4 783 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 SYDE1Q6ZW31 735 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 OTOP3Q7RTS5 596 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 ATL2Q8NHH9 583 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 ITFG1Q8TB96 612 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 ATG4AQ8WYN0 398 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 GCNAQ96QF7 691 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 RHOXF2Q9BQY4 288 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 CORO1BQ9BR76 489 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 NACA2Q9H009 215 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 RNF38Q9H0F5 515 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 STIM2Q9P246 746 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 DNMT3BQ9UBC3 853 aaKnown RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 NEU3Q9UQ49 428 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 RAD54BQ9Y620 910 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 HS3ST4Q9Y661 456 aa14.63□□□□□ -0.07
VPS26A-209ENST00000497564 KIF26AQ9ULI4 1882 aaPredicted RBP14.63□□□□□ -0.07
VPS26A-209ENST00000497564 ZNF318Q5VUA4 2279 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 PRR33A8MZF0 331 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 DYNC1I1O14576 645 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 MCF2LO15068 1137 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 FGF10O15520 208 aaPredicted RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 LATS1O95835 1130 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 PECAM1P16284 738 aaPredicted RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 AMPD1P23109 780 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 MCM3P25205 808 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 TNFRSF8P28908 595 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 SLC7A9P82251 487 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 XRCC4Q13426 336 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 PIK3R6Q5UE93 754 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 CCDC105Q8IYK2 499 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 ZNF683Q8IZ20 524 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 SEC14L1Q92503 715 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 P3H4Q92791 437 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 TBC1D31Q96DN5 1066 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 ZFRQ96KR1 1074 aaKnown RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 PPARGC1AQ9UBK2 798 aaKnown RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 DMGDHQ9UI17 866 aaKnown RBP14.62□□□□□ -0.07
VPS26A-209ENST00000497564 ZMYM5Q9UJ78 669 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 RAB21Q9UL25 225 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 DNPEPQ9ULA0 475 aa14.62□□□□□ -0.07
VPS26A-209ENST00000497564 IGLV3-10A0A075B6K4 115 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 TMEM221A6NGB7 291 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 WASH4PA8MWX3 477 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 E9PAM4 449 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 M0R296 226 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 TTI1O43156 1089 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 STC2O76061 302 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 HEXIM1O94992 359 aaKnown RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 ECEL1O95672 775 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 MOCS2O96007 188 aaPredicted RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 PDGFBP01127 241 aaPredicted RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 ERCC2P18074 760 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 FSHRP23945 695 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 KCNJ1P48048 391 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 HARS2P49590 506 aaKnown RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 SNX1Q13596 522 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 SLC5A9Q2M3M2 681 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 C5orf22Q49AR2 442 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 MS4A13Q5J8X5 152 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 PDZD4Q76G19 769 aaPredicted RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 BZW1Q7L1Q6 419 aaKnown RBP14.61□□□□□ -0.07
VPS26A-209ENST00000497564 JAMLQ86YT9 394 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 HAUS1Q96CS2 278 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 ASIC4Q96FT7 647 aa14.61□□□□□ -0.07
VPS26A-209ENST00000497564 OLFM3Q96PB7 478 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms