RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 TJP2Q9UDY2 1190 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
SRRM1-220ENST00000496882 GGA2Q9UJY4 613 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 STOML2Q9UJZ1 356 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 SLC6A14Q9UN76 642 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 CNTN6Q9UQ52 1028 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 TLR6Q9Y2C9 796 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 PCDHGA11Q9Y5H2 935 aa8.14□□□□□ -1.11
SRRM1-220ENST00000496882 EML5Q05BV3 1969 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SPTBN4Q9H254 2564 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ESPNB1AK53 854 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 E5RJQ4 531 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 H0Y626 953 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 IGLV3-27P01718 113 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ASLP04424 464 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SLC2A3P11169 496 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SLC9A1P19634 815 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ABCB4P21439 1286 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ITPKAP23677 461 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ERCC5P28715 1186 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 MAPK8P45983 427 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 NOVA1P51513 510 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 YWHAZP63104 245 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 IRX4P78413 519 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 CDK17Q00537 523 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SFSWAPQ12872 951 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 MTA1Q13330 715 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 PDCLQ13371 301 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 TTC31Q49AM3 519 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 EFHC1Q5JVL4 640 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 PIK3R6Q5UE93 754 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 RNF219Q5W0B1 726 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 MBLAC2Q68D91 279 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 RFWD3Q6PCD5 774 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SLC23A3Q6PIS1 610 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 LRSAM1Q6UWE0 723 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 BEND5Q7L4P6 421 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 CHSY1Q86X52 802 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 TMPRSS6Q8IU80 811 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 CARNMT1Q8N4J0 409 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 FRMD1Q8N878 549 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 MSANTD4Q8NCY6 345 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 DQX1Q8TE96 717 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 GBP4Q96PP9 640 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 ZSWIM1Q9BR11 485 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 TUBGCP2Q9BSJ2 902 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 GTPBP2Q9BX10 602 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 LSM14BQ9BX40 385 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 NDST4Q9H3R1 872 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SUN2Q9UH99 717 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 DNAJC12Q9UKB3 198 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 PILRBQ9UKJ0 227 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 NAALADL1Q9UQQ1 740 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 FCF1Q9Y324 198 aaKnown RBP8.13□□□□□ -1.11
SRRM1-220ENST00000496882 THADAQ6YHU6 1953 aa8.13□□□□□ -1.11
SRRM1-220ENST00000496882 SYNJ2BP-COX16A0A087WUM0 186 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 GOLGA6L7A0A1B0GV03 622 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 F5H5T6 163 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 RNASEH1O60930 286 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 HSF2BPO75031 334 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 KCNK5O95279 499 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 TRUB2O95900 331 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 DNTTP04053 509 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 GLI1P08151 1106 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 SERPINF2P08697 491 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 DLDP09622 509 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ENGP17813 658 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PRKCHP24723 683 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PON1P27169 355 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 HLA-FP30511 346 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 RDXP35241 583 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 NNMTP40261 264 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 RPL34P49207 117 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ENPP2Q13822 863 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 RAPGEF1Q13905 1077 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 VWA3BQ502W6 1294 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 DCAF6Q58WW2 860 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 CT47A1Q5JQC4 288 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 RABGAP1LQ5R372 815 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 TTC39BQ5VTQ0 682 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 OR6B2Q6IFH4 312 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PSAPL1Q6NUJ1 521 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 GJB7Q6PEY0 223 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 C11orf57Q6ZUT1 292 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 TMEM110Q86TL2 294 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 TAC4Q86UU9 113 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 CACUL1Q86Y37 369 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PASD1Q8IV76 773 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 LGI2Q8N0V4 545 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ANKRD20A12PQ8NF67 263 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 OR2T3Q8NH03 318 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 CYB5D2Q8WUJ1 264 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms