RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF783Q6ZMS7 281 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TPRG1Q6ZUI0 275 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 TMEM130Q8N3G9 435 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 BBOF1Q8ND07 529 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 FAM3CQ92520 227 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ARHGEF26Q96DR7 871 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 KLF16Q9BXK1 252 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 FBRSQ9HAH7 460 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 NMUR1Q9HB89 426 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 FAM92AA1XBS5 289 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CBX4O00257 560 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 STC2O76061 302 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 FTCDO95954 541 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 RHOAP61586 193 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 SNRPD1P62314 119 aaKnown RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CALCOCO2Q13137 446 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 AUHQ13825 339 aaKnown RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 DHCR24Q15392 516 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 LY6G5CQ5SRR4 150 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 MPP7Q5T2T1 576 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 MAATS1Q7Z4T9 603 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 CCDC105Q8IYK2 499 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ATP11CQ8NB49 1132 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 PGAP3Q96FM1 320 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-212ENST00000496462 MYADMQ96S97 322 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF670Q9BS34 389 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 EBF3Q9H4W6 596 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 ARHGEF3Q9NR81 526 aa8.88□□□□□ -0.99
U2AF1-212ENST00000496462 A0A1W2PQ67 120 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 BUB1BO60566 1050 aaPredicted RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 PABPC1P11940 636 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TCF3P15923 654 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TGM2P21980 687 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 MLLT6P55198 1093 aaPredicted RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 LAMB3Q13751 1172 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 GPRIN1Q7Z2K8 1008 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 NIPA2Q8N8Q9 360 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 JOSD2Q8TAC2 188 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 NDRG1Q92597 394 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SPACA7Q96KW9 195 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TTC1Q99614 292 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 ECT2Q9H8V3 914 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 KCNK12Q9HB15 430 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 UBA2Q9UBT2 640 aaPredicted RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SEPT3Q9UH03 358 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CTAGE15A4D2H0 777 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 MTA2O94776 668 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CFHP08603 1231 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CTAGE8P0CG41 777 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 EIF2DP41214 584 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 KDSRQ06136 332 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 MLF2Q15773 248 aaPredicted RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SCD5Q86SK9 330 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CTAGE6Q86UF2 777 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CTAGE4Q8IX94 777 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 OR8D1Q8WZ84 308 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 PDLIM2Q96JY6 352 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 IER2Q9BTL4 223 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SNRNP25Q9BV90 132 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TRPV4Q9HBA0 871 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TAS2R14Q9NYV8 317 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 CLEC1BQ9P126 229 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 IPO11Q9UI26 975 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 C2CD4DB7Z1M9 353 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 E9PAM4 449 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 ZDHHC11BP0C7U3 371 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TYRP14679 529 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 HCAR3P49019 387 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SLC44A4Q53GD3 710 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TFDP3Q5H9I0 405 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 TANGO2Q6ICL3 276 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SYNPOQ8N3V7 929 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 MSLNLQ96KJ4 702 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 C16orf45Q96MC5 204 aaPredicted RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 SRPK1Q96SB4 655 aaKnown RBP8.87□□□□□ -0.99
U2AF1-212ENST00000496462 PRRX2Q99811 253 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 OSBPL8Q9BZF1 889 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 WNT16Q9UBV4 365 aa8.87□□□□□ -0.99
U2AF1-212ENST00000496462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 KRIT1O00522 736 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 HEXIM1O94992 359 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 IFNB1P01574 187 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 BMP1P13497 986 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 HADHBP55084 474 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 AP1B1Q10567 949 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 USP4Q13107 963 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CCDC142Q17RM4 750 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 SLC45A4Q5BKX6 768 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 MS4A13Q5J8X5 152 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 SYPL2Q5VXT5 272 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 HFE2Q6ZVN8 426 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 C11orf74Q86VG3 221 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 NAT16Q8N8M0 369 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CLEC4CQ8WTT0 213 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TDRD15B5MCY1 1934 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 ILVBLA1L0T0 632 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms