RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ZNF814B7Z6K7 855 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 NTN1O95631 604 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 IGFBP2P18065 325 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 PDIA3P30101 505 aaKnown RBP6.37□□□□□ -1.39
SF3B1-212ENST00000496458 PUM3Q15397 648 aaKnown RBP6.37□□□□□ -1.39
SF3B1-212ENST00000496458 LEXMQ3ZCV2 418 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 ZACNQ401N2 412 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 EME1Q96AY2 570 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 KATNAL1Q9BW62 490 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 CHMP4AQ9BY43 222 aa6.37□□□□□ -1.39
SF3B1-212ENST00000496458 A0A0G2JK05 382 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 KIR2DS5A0A0G2JLQ3 304 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 DPPA5A6NC42 116 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A18PA6NE21 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A16PA6NEW6 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A9PA6NNJ1 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A5PA8MXJ8 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 KIR2DS3K7RE56 304 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 TRIM38O00635 465 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 PRPF4O43172 522 aaKnown RBP eCLIP6.36□□□□□ -1.392e-9■□□□□ 8.5
SF3B1-212ENST00000496458 NDUFB8O95169 186 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 LARGE1O95461 756 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 CYP3A4P08684 503 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A15PP0C7V4 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 FAM90A14PP0C7W9 464 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 TNFRSF1BP20333 461 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 RBM6P78332 1123 aaKnown RBP6.36□□□□□ -1.39
SF3B1-212ENST00000496458 GALNT1Q10472 559 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-212ENST00000496458 DLGAP5Q15398 846 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 SMTNL2Q2TAL5 461 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 KIAA1755Q5JYT7 1200 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 MANEAQ5SRI9 462 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 ATPAF1Q5TC12 328 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-212ENST00000496458 TMEM88Q6PEY1 159 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 C1orf228Q6PIY5 440 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 DDIASQ8IXT1 998 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 PAQR4Q8N4S7 273 aaPredicted RBP6.36□□□□□ -1.39
SF3B1-212ENST00000496458 ATG16L2Q8NAA4 619 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 CLEC4CQ8WTT0 213 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 NAF1Q96HR8 494 aaKnown RBP6.36□□□□□ -1.39
SF3B1-212ENST00000496458 NLRP4Q96MN2 994 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 RTKNQ9BST9 563 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 DAAM1Q9Y4D1 1078 aa6.36□□□□□ -1.39
SF3B1-212ENST00000496458 IGLV5-39A0A0G2JS06 123 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 B4DGG1 531 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 RHODO00212 210 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 SYT5O00445 386 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 NFATC1O95644 943 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 WNT1P04628 370 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 ITGA2BP08514 1039 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 CIITAP33076 1130 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 LINC00205P59089 165 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 ICA1Q05084 483 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 INPP5JQ15735 1006 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-212ENST00000496458 TRIM60Q495X7 471 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 B4GALNT4Q76KP1 1039 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 VPS37AQ8NEZ2 397 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 RSC1A1Q92681 617 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 SLC25A28Q96A46 364 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
SF3B1-212ENST00000496458 TMEM120AQ9BXJ8 343 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 FAM234AQ9H0X4 552 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 PLCB1Q9NQ66 1216 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 DECR2Q9NUI1 292 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 LRFN1Q9P244 771 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 PCDHA12Q9UN75 941 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 LAMP3Q9UQV4 416 aa6.35□□□□□ -1.39
SF3B1-212ENST00000496458 COPG1Q9Y678 874 aaKnown RBP6.35□□□□□ -1.39
SF3B1-212ENST00000496458 CYP3A7-CYP3A51PA0A087WV96 503 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 TMEM272A0A1B0GTI8 110 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 SYF2O95926 243 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 CYP3A7P24462 503 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 ALDH7A1P49419 539 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 FHL1Q13642 323 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 C6orf10Q5SRN2 563 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 ISM2Q6H9L7 571 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 RFX8Q6ZV50 586 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 CYB5R4Q7L1T6 521 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 EXD3Q8N9H8 876 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 NSMCE1Q8WV22 266 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 ATP2A3Q93084 1043 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 EID2BQ96D98 161 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 MSI2Q96DH6 328 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 ADAD1Q96M93 576 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 MPHOSPH6Q99547 160 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 WACQ9BTA9 647 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 BRD8Q9H0E9 1235 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 MLXIPQ9HAP2 919 aa6.34□□□□□ -1.39
SF3B1-212ENST00000496458 LIN7CQ9NUP9 197 aaKnown RBP6.34□□□□□ -1.39
SF3B1-212ENST00000496458 LMTK3Q96Q04 1460 aa6.34□□□□□ -1.4
SF3B1-212ENST00000496458 FAM90A10PA6NDY2 464 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 CXorf65A6NEN9 183 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 AGAP5A6NIR3 686 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 MBD3L5A6NJ08 208 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-212ENST00000496458 CD8B2A6NJW9 211 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 A6NNC1 897 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 F5H423 210 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-212ENST00000496458 ACKR2O00590 384 aa6.33□□□□□ -1.4
SF3B1-212ENST00000496458 ZC3H11AO75152 810 aaKnown RBP eCLIP6.33□□□□□ -1.4
SF3B1-212ENST00000496458 ACTL6BO94805 426 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms