RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SIPA1Q96FS4 1042 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.2
HDAC4-213ENST00000496347 GANQ9H2C0 597 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 CD93Q9NPY3 652 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 TMEM9BQ9NQ34 198 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 STIM2Q9P246 746 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 STAP1Q9ULZ2 295 aa16.27■□□□□ 0.2
HDAC4-213ENST00000496347 NUMA1Q14980 2115 aa16.27■□□□□ 0.19
HDAC4-213ENST00000496347 A0A1B0GVM2 712 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 TCAF2A6NFQ2 919 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 LGALS16A8MUM7 142 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 PATE3B3GLJ2 98 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 TM4SF5O14894 197 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 GRAP2O75791 330 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 MOCS3O95396 460 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ACADMP11310 421 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 HLA-EP13747 358 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 CSKP41240 450 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 MATKP42679 507 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 GABRB2P47870 512 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 TPMTP51580 245 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ZBTB16Q05516 673 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ARID5BQ14865 1188 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 DUOXA1Q1HG43 343 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 RABGAP1LQ5R372 815 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 SYCP2LQ5T4T6 812 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ZNF677Q86XU0 584 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 CARNMT1Q8N4J0 409 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 CADM4Q8NFZ8 388 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 TTC17Q96AE7 1141 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 MYEOVQ96EZ4 313 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-213ENST00000496347 PRMT1Q99873 361 aaKnown RBP16.26■□□□□ 0.19
HDAC4-213ENST00000496347 PCED1AQ9H1Q7 454 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 ITM2CQ9NQX7 267 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 TMEM74BQ9NUR3 256 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 SUSD2Q9UGT4 822 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 PAXBP1Q9Y5B6 917 aa16.26■□□□□ 0.19
HDAC4-213ENST00000496347 CFIP05156 583 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 NOS2P35228 1153 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 OXCT1P55809 520 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 ST8SIA6P61647 398 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 IRX4P78413 519 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 TTC31Q49AM3 519 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 PITRM1Q5JRX3 1037 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 WDR45BQ5MNZ6 344 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 NOP9Q86U38 636 aaKnown RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 CACUL1Q86Y37 369 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 SLC41A1Q8IVJ1 513 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 RNF34Q969K3 372 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 TOE1Q96GM8 510 aaKnown RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 VPS16Q9H269 839 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 FAM207AQ9NSI2 230 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 FANCLQ9NW38 375 aa16.25■□□□□ 0.19
HDAC4-213ENST00000496347 WSB2Q9NYS7 404 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 KIAA1522Q9P206 1035 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-213ENST00000496347 ITIH6Q6UXX5 1313 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 ADAMTS9Q9P2N4 1935 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 C4orf47A7E2U8 309 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 MEI4A8MW99 385 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 H0Y626 953 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SRPRAP08240 638 aaKnown RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 ADRB1P08588 477 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SERPINF2P08697 491 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 JAM2P57087 298 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 NOMO3P69849 1222 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SLC12A1Q13621 1099 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 PLEKHG6Q3KR16 790 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 BRMS1LQ5PSV4 323 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 FAM102AQ5T9C2 384 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 OTUD1Q5VV17 481 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 ERICH1Q86X53 443 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 CFAP52Q8N1V2 620 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 NT5C3BQ969T7 300 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 C18orf8Q96DM3 657 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 PGAP3Q96FM1 320 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 MYO19Q96H55 970 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 NPY6RQ99463 290 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 NUP58Q9BVL2 599 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 CAPN10Q9HC96 672 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 PRSS16Q9NQE7 514 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SUN2Q9UH99 717 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 LIMA1Q9UHB6 759 aaKnown RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 NOCTQ9UK39 431 aaKnown RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 INTS6Q9UL03 887 aaKnown RBP16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SLC6A14Q9UN76 642 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 SIK3Q9Y2K2 1263 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 DOCK4Q8N1I0 1966 aa16.24■□□□□ 0.19
HDAC4-213ENST00000496347 M0QYT0 321 aa16.23■□□□□ 0.19
HDAC4-213ENST00000496347 CDX4O14627 284 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-213ENST00000496347 GNSP15586 552 aa16.23■□□□□ 0.19
HDAC4-213ENST00000496347 ZNF18P17022 549 aa16.23■□□□□ 0.19
HDAC4-213ENST00000496347 ENGP17813 658 aa16.23■□□□□ 0.19
HDAC4-213ENST00000496347 SOX5P35711 763 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms