RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 MARK1Q9P0L2 795 aa13.93□□□□□ -0.18
PTPN7-218ENST00000496197 STIM2Q9P246 746 aa13.93□□□□□ -0.18
PTPN7-218ENST00000496197 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
PTPN7-218ENST00000496197 NUP205Q92621 2012 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 DRGXA6NNA5 263 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ENC1O14682 589 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 NFATC1O95644 943 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 KRT1P04264 644 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 KRT7P08729 469 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ADH5P11766 374 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 SRFP11831 508 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 TYRP14679 529 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 KDELR1P24390 212 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 HOXC13P31276 330 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 NUMBP49757 651 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 LLGL1Q15334 1064 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ANO4Q32M45 955 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-218ENST00000496197 NLRP14Q86W24 1093 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 PSTKQ8IV42 348 aaKnown RBP13.92□□□□□ -0.18
PTPN7-218ENST00000496197 GJD3Q8N144 294 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 NAT16Q8N8M0 369 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 DDI1Q8WTU0 396 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
PTPN7-218ENST00000496197 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ALS2CR12Q96Q35 445 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 BBS2Q9BXC9 721 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 TMEM51Q9NW97 253 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 MUTYHQ9UIF7 546 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 DUSP12Q9UNI6 340 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 SORCS3Q9UPU3 1222 aa13.92□□□□□ -0.18
PTPN7-218ENST00000496197 MUC22E2RYF6 1773 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 LRRD1A4D1F6 860 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 ANTXRLA6NF34 631 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 EEF2KO00418 725 aaKnown RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 GJA4P35212 333 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 SLC6A11P48066 632 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 ADCY2Q08462 1091 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 ZNF211Q13398 564 aaPredicted RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 DPYSQ14117 519 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 MPPE1Q53F39 396 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 FSCBQ5H9T9 825 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 TXNDC11Q6PKC3 985 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 MFSD7Q6UXD7 560 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 RFX8Q6ZV50 586 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 TFAP2DQ7Z6R9 452 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 SFTPA1Q8IWL2 248 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 ETFBKMTQ8IXQ9 262 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 KATNAL2Q8IYT4 538 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 KCTD6Q8NC69 237 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 TBC1D31Q96DN5 1066 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 CSPG4P5Q96PW8 444 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 PPARGC1AQ9UBK2 798 aaKnown RBP13.91□□□□□ -0.18
PTPN7-218ENST00000496197 TRIOO75962 3097 aa13.91□□□□□ -0.18
PTPN7-218ENST00000496197 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 CCDC66A2RUB6 948 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 PYGMP11217 842 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 AMPD1P23109 780 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 EPHB2P29323 1055 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 OPRD1P41143 372 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 TPI1P60174 286 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 MTA1Q13330 715 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 KRT81Q14533 505 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 ITPRIPL2Q3MIP1 535 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 ZFYVE27Q5T4F4 411 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 CXorf57Q6NSI4 855 aaKnown RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 RWDD4Q6NW29 188 aaKnown RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 TP53INP2Q8IXH6 220 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 NPWQ8N729 165 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 HJURPQ8NCD3 748 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 PCDH19Q8TAB3 1148 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 FAF2Q96CS3 445 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 PSMB7Q99436 277 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 EPAS1Q99814 870 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 DDX50Q9BQ39 737 aaKnown RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 CALN1Q9BXU9 219 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 ZYG11BQ9C0D3 744 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 FBRSL1Q9HCM7 1045 aaKnown RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 TRPV5Q9NQA5 729 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 ARHGEF4Q9NR80 690 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 DDX56Q9NY93 547 aaKnown RBP13.9□□□□□ -0.18
PTPN7-218ENST00000496197 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
PTPN7-218ENST00000496197 DCLK1O15075 740 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 KIF5CO60282 957 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 CACNG3O60359 315 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 LUC7L3O95232 432 aaKnown RBP13.89□□□□□ -0.19
PTPN7-218ENST00000496197 ADH1CP00326 375 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 KRT10P13645 584 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 ERCC2P18074 760 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 CDKN2BP42772 138 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 GNG11P61952 73 aa13.89□□□□□ -0.19
PTPN7-218ENST00000496197 GAD2Q05329 585 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms