RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 C2orf15Q8WU43 125 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 ATXN2LQ8WWM7 1075 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 NT5C3BQ969T7 300 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 CCT8L2Q96SF2 557 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ZIC5Q96T25 663 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 PAFAH2Q99487 392 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SMOQ99835 787 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 LPIN3Q9BQK8 851 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 UNC93B1Q9H1C4 597 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TRPV6Q9H1D0 765 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ARHGEF4Q9NR80 690 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 COMMD8Q9NX08 183 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 MIOSQ9NXC5 875 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 SEPT10Q9P0V9 454 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TXNDC16Q9P2K2 825 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 ZC3H7BQ9UGR2 993 aaKnown RBP7.13□□□□□ -1.27
USP39-219ENST00000496047 FBXW11Q9UKB1 542 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TRHDEQ9UKU6 1024 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 NAALADL1Q9UQQ1 740 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 PCDHB5Q9Y5E4 795 aa7.13□□□□□ -1.27
USP39-219ENST00000496047 TM9SF1O15321 606 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TP73O15350 636 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PRPF4O43172 522 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP39-219ENST00000496047 MFSD11O43934 449 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 KRT38O76015 456 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 BEST1O76090 585 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TMEM63AO94886 807 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 SUN1O94901 812 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 NEFHP12036 1026 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CPB1P15086 417 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CA4P22748 312 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CCR1P32246 355 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ADRA1BP35368 520 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PLA2G5P39877 138 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ELK3P41970 407 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 MAGEA11P43364 429 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 SLC5A3P53794 718 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 IFI35P80217 286 aaPredicted RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 CBLBQ13191 982 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ITIH4Q14624 930 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 AGERQ15109 404 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PARP6Q2NL67 630 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ANO4Q32M45 955 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CTXN3Q4LDR2 81 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 SLC39A12Q504Y0 691 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ANKRD20A2Q5SQ80 823 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ANKRD20A1Q5TYW2 823 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TTC39BQ5VTQ0 682 aaPredicted RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 ANKRD20A3Q5VUR7 823 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 FYB2Q5VWT5 728 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 BSPRYQ5W0U4 402 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 NUGGCQ68CJ6 796 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PM20D1Q6GTS8 502 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CASC4Q6P4E1 433 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 LIAT1Q6ZQX7 453 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PAQR9Q6ZVX9 377 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 BNIPLQ7Z465 357 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CCDC91Q7Z6B0 441 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 SRLQ86TD4 932 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PRUNE1Q86TP1 453 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TRABD2AQ86V40 505 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TRIM42Q8IWZ5 723 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CTAGE3PQ8IX95 158 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 ATP6V0D2Q8N8Y2 350 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 COLGALT1Q8NBJ5 622 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 C3orf58Q8NDZ4 430 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 GSDMBQ8TAX9 411 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CCDC110Q8TBZ0 833 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 SPPL2BQ8TCT7 592 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 MGARPQ8TDB4 240 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 LRRC8CQ8TDW0 803 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 FBF1Q8TES7 1133 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 DEPDC1BQ8WUY9 529 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 NSMCE1Q8WV22 266 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 HDAC11Q96DB2 347 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TBC1D31Q96DN5 1066 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 MTBPQ96DY7 904 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CFAP36Q96G28 342 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 MAGEB18Q96M61 343 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 OLFM3Q96PB7 478 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 PRMT1Q99873 361 aaKnown RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 ARHGAP9Q9BRR9 750 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TMEM175Q9BSA9 504 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TKTL2Q9H0I9 626 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 TRABDQ9H4I3 376 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ACTR5Q9H9F9 607 aaPredicted RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 ETNK1Q9HBU6 452 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 PIGVQ9NUD9 493 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ABI2Q9NYB9 513 aaPredicted RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 DTLQ9NZJ0 730 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 FNIP2Q9P278 1114 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CTNNAL1Q9UBT7 734 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 ADAM28Q9UKQ2 775 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 FCF1Q9Y324 198 aaKnown RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 RRP15Q9Y3B9 282 aaKnown RBP7.12□□□□□ -1.27
USP39-219ENST00000496047 MAD1L1Q9Y6D9 718 aa7.12□□□□□ -1.27
USP39-219ENST00000496047 CACNA1AO00555 2505 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms