RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 BUD23O43709 281 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 PGAM1P18669 254 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TKTP29401 623 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 COPAP53621 1224 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ZRSR2Q15696 482 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TBCCQ15814 346 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TCHHL1Q5QJ38 904 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 NAPRTQ6XQN6 538 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 CYS1Q717R9 158 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 OR52K1Q8NGK4 314 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 ATP2A3Q93084 1043 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 AGAP2Q99490 1192 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 GCOM2Q9BZD3 368 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 CAB39LQ9H9S4 337 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 PACSIN3Q9UKS6 424 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 MAGEA13PA6NCF6 341 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 H3BRB1 525 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 DCXO43602 365 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 LYNP07948 512 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 RALBP11234 206 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 NDUFV1P49821 464 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 SULT1E1P49888 294 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 EFHC1Q5JVL4 640 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 OTUD1Q5VV17 481 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 PDPK2PQ6A1A2 396 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 FRMD7Q6ZUT3 714 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 HPS6Q86YV9 775 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
PTPN7-217ENST00000495688 SNX15Q9NRS6 342 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 DCDC2Q9UHG0 476 aa13.36□□□□□ -0.27
PTPN7-217ENST00000495688 NUP205Q92621 2012 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ZSWIM8A7E2V4 1837 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CLDN5O00501 218 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 BEST1O76090 585 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FESP07332 822 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CYP2C8P10632 490 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 MLNP12872 115 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FDFT1P37268 417 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 BCAT1P54687 386 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 IRF9Q00978 393 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ADIGQ0VDE8 80 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 NME3Q13232 169 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CCNIQ14094 377 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ZBTB6Q15916 424 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 C9orf57Q5W0N0 161 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 DCLK2Q8N568 766 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ACVR1CQ8NER5 493 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 SNX27Q96L92 541 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 S100A14Q9HCY8 104 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ADAMTS6Q9UKP5 1117 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 E9PBE3 544 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FAM72CH0Y354 149 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ZBTB14O43829 449 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 KLHL41O60662 606 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 RNASEH1O60930 286 aaKnown RBP13.35□□□□□ -0.27
PTPN7-217ENST00000495688 AMHP03971 560 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CRABP2P29373 138 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 GNL1P36915 607 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ASPHQ12797 758 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 KYAT1Q16773 422 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 TMCO4Q5TGY1 634 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FAM72AQ5TYM5 149 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 SYPL2Q5VXT5 272 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FAM72DQ6L9T8 149 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 SLC30A9Q6PML9 568 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 PIGZQ86VD9 579 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 FAM72BQ86X60 149 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 DEFB107AQ8IZN7 70 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 ADAM32Q8TC27 787 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 MAPK15Q8TD08 544 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 PPP4R1Q8TF05 950 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CERS2Q96G23 380 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
PTPN7-217ENST00000495688 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-217ENST00000495688 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
PTPN7-217ENST00000495688 LTBP3Q9NS15 1303 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms