RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MAGEC1O60732 1142 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 SIN3BO75182 1162 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 ZBED1O96006 694 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 MT-CO3P00414 261 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 SLC8A1P32418 973 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 CD70P32970 193 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 NUDT1P36639 197 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 PIK3CAP42336 1068 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 PCBP4P57723 403 aaKnown RBP13.98□□□□□ -0.17
COL1A1-209ENST00000495677 ERVPABLB-1P60509 514 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 ST8SIA6P61647 398 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 C9orf64Q5T6V5 341 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 PIK3R6Q5UE93 754 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL1A1-209ENST00000495677 SCML4Q8N228 414 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 ANKRD52Q8NB46 1076 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 HEXIM2Q96MH2 286 aaKnown RBP13.98□□□□□ -0.17
COL1A1-209ENST00000495677 DPH1Q9BZG8 443 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 KDM4CQ9H3R0 1056 aa13.98□□□□□ -0.17
COL1A1-209ENST00000495677 KIF26BQ2KJY2 2108 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 ITIH6Q6UXX5 1313 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SPTLC2O15270 562 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 MID1O15344 667 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 NEFLP07196 543 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SRPRAP08240 638 aaKnown RBP13.97□□□□□ -0.17
COL1A1-209ENST00000495677 C6P13671 934 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 GOT1P17174 413 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 TKTL1P51854 596 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SLC8A3P57103 927 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 KCNC4Q03721 635 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-209ENST00000495677 STK38Q15208 465 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SPATS2Q86XZ4 545 aaKnown RBP13.97□□□□□ -0.17
COL1A1-209ENST00000495677 DHX40Q8IX18 779 aaKnown RBP13.97□□□□□ -0.17
COL1A1-209ENST00000495677 WFDC5Q8TCV5 224 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 GANCQ8TET4 914 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 TTC9Q92623 222 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 FAM131CQ96AQ9 280 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SERAC1Q96JX3 654 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 MRGPRX3Q96LB0 322 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 FAM129BQ96TA1 746 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 OMDQ99983 421 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 ABCC13Q9NSE7 274 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 ARHGAP20Q9P2F6 1191 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 SFMBT1Q9UHJ3 866 aa13.97□□□□□ -0.17
COL1A1-209ENST00000495677 CUTAO60888 179 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 RNASEH2AO75792 299 aaKnown RBP13.96□□□□□ -0.17
COL1A1-209ENST00000495677 IGLV3-27P01718 113 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 NR3C1P04150 777 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 C5AR1P21730 350 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 SGSHP51688 502 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 VAMP7P51809 220 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 STK4Q13043 487 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 CDCP2Q5VXM1 449 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 BSPRYQ5W0U4 402 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 NAPEPLDQ6IQ20 393 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 SHC4Q6S5L8 630 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 IGF2-ASQ6U949 168 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 UNC45BQ8IWX7 931 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 SLC4A11Q8NBS3 891 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 RNF139Q8WU17 664 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 ULBP1Q9BZM6 244 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 SEMA4CQ9C0C4 833 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 BLZF1Q9H2G9 400 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 MTG2Q9H4K7 406 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 INTS6Q9UL03 887 aaKnown RBP13.96□□□□□ -0.17
COL1A1-209ENST00000495677 DMTF1Q9Y222 760 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 FRMD4BQ9Y2L6 1034 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 TRPM6Q9BX84 2022 aa13.96□□□□□ -0.17
COL1A1-209ENST00000495677 RP1P56715 2156 aa13.96□□□□□ -0.18
COL1A1-209ENST00000495677 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 POLR2DO15514 142 aaKnown RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 ARHGAP6O43182 974 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 KLRC4O43908 158 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 LZTS3O60299 673 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 TBL1XO60907 577 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 ADH1BP00325 375 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 CD58P19256 250 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 CASP1P29466 404 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 LSSP48449 732 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 RAD23BP54727 409 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 ADPRHP54922 357 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 VAC14Q08AM6 782 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 CUL4BQ13620 913 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 NFIL3Q16649 462 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 ZNF394Q53GI3 561 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 FAM133BQ5BKY9 247 aaKnown RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 MSANTD2Q6P1R3 559 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 PRPF39Q86UA1 669 aaKnown RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 MMAAQ8IVH4 418 aaKnown RBP13.95□□□□□ -0.18
COL1A1-209ENST00000495677 AADATQ8N5Z0 425 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 FAM181AQ8N9Y4 354 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 TAS1R2Q8TE23 839 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 MED8Q96G25 268 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
COL1A1-209ENST00000495677 EDDM13A0A1B0GTR0 161 aa13.94□□□□□ -0.18
COL1A1-209ENST00000495677 SIGLEC6O43699 453 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms