RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, human

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-211	ENST00000495176	GGCX	P38435	758 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	CSK	P41240	450 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	IRX4	P78413	519 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	ZNF33A	Q06730	810 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	ENPP2	Q13822	863 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	PTPRN	Q16849	979 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	TRIM61	Q5EBN2	209 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	CAVIN1	Q6NZI2	390 aa	Known RBP	18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	FAM124A	Q86V42	546 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	ZDHHC17	Q8IUH5	632 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	RGL4	Q8IZJ4	473 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	DDX1	Q92499	740 aa	Known RBP	18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	SIK2	Q9H0K1	926 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	MTG2	Q9H4K7	406 aa		18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	LIMA1	Q9UHB6	759 aa	Known RBP	18.73	■□□□□ 0.59
CYTH3-211	ENST00000495176	DLD	P09622	509 aa	Known RBP	18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	NOS2	P35228	1153 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	SOX5	P35711	763 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	SULT1E1	P49888	294 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	LIMK1	P53667	647 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	ST8SIA6	P61647	398 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	ANO6	Q4KMQ2	910 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	SLC26A9	Q7LBE3	791 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	SYT12	Q8IV01	421 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	MSANTD4	Q8NCY6	345 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	NEK11	Q8NG66	645 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	TOE1	Q96GM8	510 aa	Known RBP	18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	HSPA12B	Q96MM6	686 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	NAT10	Q9H0A0	1025 aa	Known RBP	18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	FSCN3	Q9NQT6	498 aa		18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	KIAA1522	Q9P206	1035 aa	Predicted RBP	18.72	■□□□□ 0.59
CYTH3-211	ENST00000495176	C4orf47	A7E2U8	309 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	LGALS16	A8MUM7	142 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	MOCS3	O95396	460 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	ATP1A3	P13637	1013 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	ZNF18	P17022	549 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	TFE3	P19532	575 aa	Predicted RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	MAOB	P27338	520 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	CD6	P30203	668 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	STAT1	P42224	750 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	MATK	P42679	507 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	CTSO	P43234	321 aa	Predicted RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	MAPK8	P45983	427 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	TPMT	P51580	245 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	COPA	P53621	1224 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	MTA1	Q13330	715 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	UAP1L1	Q3KQV9	507 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	PITRM1	Q5JRX3	1037 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	METTL3	Q86U44	580 aa	Known RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	XYLT1	Q86Y38	959 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	SLC41A1	Q8IVJ1	513 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	OR2T3	Q8NH03	318 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	EPS8L1	Q8TE68	723 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	RPRD1A	Q96P16	312 aa	Predicted RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	GPR174	Q9BXC1	333 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	NUSAP1	Q9BXS6	441 aa	Known RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	TMEM245	Q9H330	911 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	ITM2C	Q9NQX7	267 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	INTS6	Q9UL03	887 aa	Known RBP	18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	VANGL2	Q9ULK5	521 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	SIK3	Q9Y2K2	1263 aa		18.71	■□□□□ 0.59
CYTH3-211	ENST00000495176	ASCC3	Q8N3C0	2202 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	NUMA1	Q14980	2115 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	LNP1	A1A4G5	178 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PAGE1	O75459	146 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	LSM8	O95777	96 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PDGFRA	P16234	1089 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	CDH5	P33151	784 aa	Predicted RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	CENPC	Q03188	943 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	AUH	Q13825	339 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	NCAPH	Q15003	741 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PPM1J	Q5JR12	505 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	RABGAP1L	Q5R372	815 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	RNF219	Q5W0B1	726 aa	Predicted RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	FBXL22	Q6P050	247 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	APCDD1	Q8J025	514 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	CCAR2	Q8N163	923 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	ZNF397	Q8NF99	534 aa	Predicted RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	SLC30A5	Q8TAD4	765 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	IGSF8	Q969P0	613 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	LMLN	Q96KR4	655 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PRMT1	Q99873	361 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	WDCP	Q9H6R7	721 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PRSS16	Q9NQE7	514 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PIGV	Q9NUD9	493 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	SEPT11	Q9NVA2	429 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	RRN3	Q9NYV6	651 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	SUN2	Q9UH99	717 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	NOCT	Q9UK39	431 aa	Known RBP	18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	PILRB	Q9UKJ0	227 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	STAP1	Q9ULZ2	295 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	SNX10	Q9Y5X0	201 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	HS3ST4	Q9Y661	456 aa		18.7	■□□□□ 0.58
CYTH3-211	ENST00000495176	CACNA1E	Q15878	2313 aa		18.69	■□□□□ 0.58
CYTH3-211	ENST00000495176	MEI4	A8MW99	385 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms