RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 REPS1Q96D71 796 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 ARHGAP39Q9C0H5 1083 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 ABHD16BQ9H3Z7 469 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 IFT80Q9P2H3 777 aaPredicted RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 NFU1Q9UMS0 254 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 B3GNT3Q9Y2A9 372 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
SMC4-224ENST00000494612 RB1CC1Q8TDY2 1594 aa4.98□□□□□ -1.61
SMC4-224ENST00000494612 FAM90A20PA6NIJ5 464 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 C16orf96A6NNT2 1141 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 TISP43B9A030 160 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 ATF7P17544 494 aaPredicted RBP4.97□□□□□ -1.61
SMC4-224ENST00000494612 STAT6P42226 847 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 PAPOLAP51003 745 aaKnown RBP4.97□□□□□ -1.61
SMC4-224ENST00000494612 RCAN1P53805 252 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 SHC2P98077 582 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 KPNB1Q14974 876 aaKnown RBP4.97□□□□□ -1.61
SMC4-224ENST00000494612 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 WDR93Q6P2C0 686 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 LVRNQ6Q4G3 990 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 CPOQ8IVL8 374 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 TMEM57Q8N5G2 664 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 LINS1Q8NG48 757 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 ASB12Q8WXK4 309 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 RBM17Q96I25 401 aaKnown RBP4.97□□□□□ -1.61
SMC4-224ENST00000494612 KAZALD1Q96I82 304 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 GPR78Q96P69 363 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 PRDM16Q9HAZ2 1276 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 ASNSD1Q9NWL6 643 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 ZNF521Q96K83 1311 aa4.97□□□□□ -1.61
SMC4-224ENST00000494612 PRYO14603 147 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 NCAM2O15394 837 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 TK1P04183 234 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 LYL1P12980 280 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 CERS1P27544 350 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 DUSP1P28562 367 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 EPHB2P29323 1055 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 SLC8A1P32418 973 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 FOXL2P58012 376 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 DLGAP5Q15398 846 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 SMAD1Q15797 465 aaKnown RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 ALFQ53S48 1182 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 ZNF484Q5JVG2 852 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 DGAT2L7PQ6IED9 249 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 YTHDF3Q7Z739 585 aaKnown RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 CHSY1Q86X52 802 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 C16orf71Q8IYS4 520 aaPredicted RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 ADAMTS18Q8TE60 1221 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 KCNJ9Q92806 393 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 ARRDC3Q96B67 414 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 MAELQ96JY0 434 aaKnown RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 HERC2P3Q9BVR0 1158 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 QTRT1Q9BXR0 403 aaKnown RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 CLPBQ9H078 707 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 OSBPL5Q9H0X9 879 aaPredicted RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 KCNK9Q9NPC2 374 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 G6PC2Q9NQR9 355 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 ARL8BQ9NVJ2 186 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 DERAQ9Y315 318 aa4.96□□□□□ -1.62
SMC4-224ENST00000494612 LRRFIP2Q9Y608 721 aaKnown RBP4.96□□□□□ -1.62
SMC4-224ENST00000494612 FNDC1Q4ZHG4 1894 aaPredicted RBP4.95□□□□□ -1.62
SMC4-224ENST00000494612 TTC34A8MYJ7 566 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 MATN1P21941 496 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 NDUFS1P28331 727 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 MPGP29372 298 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 SLC37A1P57057 533 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 FHL1Q13642 323 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 PFKFB3Q16875 520 aaPredicted RBP4.95□□□□□ -1.62
SMC4-224ENST00000494612 SLC4A8Q2Y0W8 1093 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 CEP78Q5JTW2 689 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 PRAMEF17Q5VTA0 474 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 RANBP10Q6VN20 620 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 MMS22LQ6ZRQ5 1243 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 LINC01465Q8N7H1 131 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 FSIP1Q8NA03 581 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 ABHD14AQ9BUJ0 271 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 PDE11AQ9HCR9 933 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 TLR8Q9NR97 1041 aaKnown RBP4.95□□□□□ -1.62
SMC4-224ENST00000494612 DNAJC16Q9Y2G8 782 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 CRYL1Q9Y2S2 319 aa4.95□□□□□ -1.62
SMC4-224ENST00000494612 EYA2O00167 538 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 GRM8O00222 908 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 PPP6CO00743 305 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 SH3BP5O60239 455 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 ALDOAP04075 364 aaKnown RBP4.94□□□□□ -1.62
SMC4-224ENST00000494612 CSF1P09603 554 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 SFPQP23246 707 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMC4-224ENST00000494612 CCKBRP32239 447 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 PCP4P48539 62 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 TUBP50607 506 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 LARS2Q15031 903 aaKnown RBP4.94□□□□□ -1.62
SMC4-224ENST00000494612 TBRG1Q3YBR2 411 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 SUPT20HL1Q3ZLR7 823 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 SLC18B1Q6NT16 456 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 DHRS13Q6UX07 377 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 VSTM1Q6UX27 236 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 LRRTM4Q86VH4 590 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 VPS52Q8N1B4 723 aa4.94□□□□□ -1.62
SMC4-224ENST00000494612 SRFBP1Q8NEF9 429 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms