RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 FAXDC2Q96IV6 333 aa10□□□□□ -0.81
UBR4-216ENST00000494503 NT5C1BQ96P26 610 aa10□□□□□ -0.81
UBR4-216ENST00000494503 SCAND2PQ9GZW5 306 aaPredicted RBP10□□□□□ -0.81
UBR4-216ENST00000494503 PABPC3Q9H361 631 aaKnown RBP10□□□□□ -0.81
UBR4-216ENST00000494503 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
UBR4-216ENST00000494503 KIAA1522Q9P206 1035 aaPredicted RBP10□□□□□ -0.81
UBR4-216ENST00000494503 TRIM49BA6NDI0 452 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 IRAK2O43187 625 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 ACSL4O60488 711 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 IL1BP01584 269 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 APOEP02649 317 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 KRT5P13647 590 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 JUPP14923 745 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 HNF1BP35680 557 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 CLDN6P56747 220 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 RPS24P62847 133 aaKnown RBP9.99□□□□□ -0.81
UBR4-216ENST00000494503 FKBP3Q00688 224 aaKnown RBP9.99□□□□□ -0.81
UBR4-216ENST00000494503 CETN1Q12798 172 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 STIM1Q13586 685 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 CST6Q15828 149 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 KCNT1Q5JUK3 1230 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 ISM2Q6H9L7 571 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 PMF1Q6P1K2 205 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 MMS22LQ6ZRQ5 1243 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 CHSY1Q86X52 802 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 ZC3H3Q8IXZ2 948 aaKnown RBP9.99□□□□□ -0.81
UBR4-216ENST00000494503 OR14C36Q8NHC7 312 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 C1orf216Q8TAB5 229 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 BAHD1Q8TBE0 780 aaPredicted RBP9.99□□□□□ -0.81
UBR4-216ENST00000494503 PIP4K2CQ8TBX8 421 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 KCTD13Q8WZ19 329 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
UBR4-216ENST00000494503 TJP2Q9UDY2 1190 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 SERGEFQ9UGK8 458 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 AK5Q9Y6K8 562 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 SHROOM3Q8TF72 1996 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 IGSF10Q6WRI0 2623 aa9.99□□□□□ -0.81
UBR4-216ENST00000494503 SYNJ2BP-COX16A0A087WUM0 186 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3DA0A087WVF3 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3IA0A087WXS9 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3EA0A087X179 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3KA0A087X1G2 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 A0A1W2PQ27 194 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 A0A1W2PQ64 194 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3FA6NER0 549 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 TTC34A8MYJ7 566 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3LB9A6J9 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 CBX4O00257 560 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 PLK4O00444 970 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 BNIP3LO60238 219 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 SMC2O95347 1197 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 ASLP04424 464 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3HP0C7X1 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 SLC8A1P32418 973 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 NNMTP40261 264 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 CTSOP43234 321 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 CTSKP43235 329 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 FMO5P49326 533 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 PMS1P54277 932 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 GALCP54803 685 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 RACK1P63244 317 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 SEMG2Q02383 582 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 DNAJC3Q13217 504 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 HNRNPA1L2Q32P51 320 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 SLC45A4Q5BKX6 768 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 FAM133BQ5BKY9 247 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 PITRM1Q5JRX3 1037 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 ZNF658Q5TYW1 1059 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 RAP1GAP2Q684P5 730 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 ANKRD40Q6AI12 368 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3GQ6DHY5 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 NADSYN1Q6IA69 706 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3CQ6IPX1 549 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 KLHL10Q6JEL2 608 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 LCLAT1Q6UWP7 414 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 RRAGAQ7L523 313 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TBC1D3Q8IZP1 549 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 LGI2Q8N0V4 545 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 EID2Q8N6I1 236 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBR4-216ENST00000494503 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 IRGQQ8WZA9 623 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 TFAP2BQ92481 460 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 RNF34Q969K3 372 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 SERAC1Q96JX3 654 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 CNDP2Q96KP4 475 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 RPL10LQ96L21 214 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 PRICKLE1Q96MT3 831 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 SERPINB11Q96P15 392 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 NUCKS1Q9H1E3 243 aaKnown RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 RSPH9Q9H1X1 276 aaPredicted RBP9.98□□□□□ -0.81
UBR4-216ENST00000494503 NEUROG2Q9H2A3 272 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 GDF3Q9NR23 364 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 COX16Q9P0S2 106 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 STOML2Q9UJZ1 356 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 KIAA1257Q9ULG3 409 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 SCML1Q9UN30 329 aa9.98□□□□□ -0.81
UBR4-216ENST00000494503 NAALADL1Q9UQQ1 740 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms