RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 CLEC4EQ9ULY5 219 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 SNX10Q9Y5X0 201 aa12.87□□□□□ -0.35
TRA2A-209ENST00000494255 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
TRA2A-209ENST00000494255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 E9PAM4 449 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CLDN11O75508 207 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 LCA5LO95447 670 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 PABPC1P11940 636 aaKnown RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 TIE1P35590 1138 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 MRE11P49959 708 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CDH4P55283 916 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 OXCT1P55809 520 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 MRPS21P82921 87 aaKnown RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 SCAPQ12770 1279 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 MTAPQ13126 283 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 ZNF177Q13360 481 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CCAR2Q8N163 923 aaKnown RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 RPLP0P6Q8NHW5 317 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 RFFLQ8WZ73 363 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 FZD10Q9ULW2 581 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 TIMM44O43615 452 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 MOCS3O95396 460 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 MIPP30301 263 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 HLA-FP30511 346 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 PCK1P35558 622 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CCR3P51677 355 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 EIF4HQ15056 248 aaKnown RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 GEN1Q17RS7 908 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 C5orf22Q49AR2 442 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 HSF5Q4G112 596 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 ERMARDQ5T6L9 678 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 TRMT11Q7Z4G4 463 aaKnown RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.86□□□□□ -0.359e-8■□□□□ 9.9
TRA2A-209ENST00000494255 ZNF513Q8N8E2 541 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-209ENST00000494255 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 BTBD6Q96KE9 485 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 CIPCQ9C0C6 399 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 USP18Q9UMW8 372 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 AP4E1Q9UPM8 1137 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 PCDHA13Q9Y5I0 950 aa12.86□□□□□ -0.35
TRA2A-209ENST00000494255 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 ZDBF2Q9HCK1 2354 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 IGLV3-10A0A075B6K4 115 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 DRGXA6NNA5 263 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 PRRT4C9JH25 899 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 LRCH4O75427 683 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
TRA2A-209ENST00000494255 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
TRA2A-209ENST00000494255 CXCL12P48061 93 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 LMAN2Q12907 356 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 SLC12A1Q13621 1099 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 GAS6Q14393 721 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 DMC1Q14565 340 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
TRA2A-209ENST00000494255 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 EPAS1Q99814 870 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 ZYG11BQ9C0D3 744 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 PPARGC1AQ9UBK2 798 aaKnown RBP12.85□□□□□ -0.35
TRA2A-209ENST00000494255 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
TRA2A-209ENST00000494255 TMEM110-MUSTN1A8MSY1 372 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 NRDCO43847 1150 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 ATP5BP06576 529 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 POLR2EP19388 210 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 L1CAMP32004 1257 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 CD70P32970 193 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 IRAK1P51617 712 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
TRA2A-209ENST00000494255 ALFQ53S48 1182 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 SDE2Q6IQ49 451 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
TRA2A-209ENST00000494255 KIAA0907Q7Z7F0 614 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms