RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 EGLN2Q96KS0 407 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 DEFB129Q9H1M3 183 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 KLC4Q9NSK0 619 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CDH7Q9ULB5 785 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 APOBEC2Q9Y235 224 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ASTN2O75129 1339 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TCRBV5S1A1TA0A578 114 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC22A1O15245 554 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SNHG28P0DPA3 235 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SCP2P22307 547 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CNGA1P29973 690 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPR3P46089 330 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SESN3P58005 492 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RPS3AP61247 264 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CTAG1AP78358 180 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 POU5F1BQ06416 359 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 BIRC3Q13489 604 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TP53BP2Q13625 1128 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NEDD9Q14511 834 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 HLTFQ14527 1009 aaKnown RBP eCLIP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 POSTNQ15063 836 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPP2R5BQ15173 497 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NAB2Q15742 525 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC178Q5BJE1 867 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF658Q5TYW1 1059 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 VSTM1Q6UX27 236 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC73Q6ZRK6 1079 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RINLQ6ZS11 566 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF34Q8IZ26 560 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CPEB3Q8NE35 698 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 LMO3Q8TAP4 145 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ASB10Q8WXI3 467 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ATP6V1G3Q96LB4 118 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FIZ1Q96SL8 496 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SERHL2Q9H4I8 314 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CAAP1Q9H8G2 361 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 KIAA1586Q9HCI6 787 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FBXO34Q9NWN3 711 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZIM2Q9NZV7 527 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCYOX1Q9UHG3 505 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZMYND8Q9ULU4 1186 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FZD1Q9UP38 647 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 DENND4CQ5VZ89 1909 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 A0A0B4J269 797 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CFAP73A6NFT4 308 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 MARCH11A6NNE9 402 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 B5MCH6 92 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SPTLC2O15270 562 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 KCNQ3O43525 872 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 AKAP10O43572 662 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RNF8O76064 485 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RECQL4O94761 1208 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 LAG3P18627 525 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 BDNFP23560 247 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 MCM3P25205 808 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RAP1GDS1P52306 607 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 VAV2P52735 878 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FOXI1Q12951 378 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TUBB3Q13509 450 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC15A2Q16348 729 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TPD52L1Q16890 204 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 MUM1Q2TAK8 710 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TIGD2Q4W5G0 525 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 DNAJC21Q5F1R6 531 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SULT6B1Q6IMI4 303 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 APOA5Q6Q788 366 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMEM126BQ8IUX1 230 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NELFCDQ8IXH7 590 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC35F6Q8N357 371 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 STKLD1Q8NE28 680 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 AFAP1L1Q8TED9 768 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RUFY2Q8WXA3 655 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CASKIN2Q8WXE0 1202 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ORAI2Q96SN7 254 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 MPHOSPH6Q99547 160 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NAPGQ99747 312 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 WDR11Q9BZH6 1224 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZWILCHQ9H900 591 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 DBF4Q9UBU7 674 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PADI4Q9UM07 663 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCDHGA2Q9Y5H1 932 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SCINQ9Y6U3 715 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 DOCK4Q8N1I0 1966 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 F8VZ95 297 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZBED4O75132 1171 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 CAND2O75155 1236 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 GFPT2O94808 682 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 RAP2AP10114 183 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTPN2P17706 415 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 RXRAP19793 462 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 SREBF1P36956 1147 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 CLK3P49761 638 aaKnown RBP2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 ERVK-21P61565 698 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 GPSM2P81274 684 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 ROR2Q01974 943 aaKnown RBP2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 PLOD1Q02809 727 aaPredicted RBP2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTP4A2Q12974 167 aa2.71□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM153CQ494X1 144 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms