RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TIMM44O43615 452 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 GFPT2O94808 682 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 ADCY5O95622 1261 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 GLI1P08151 1106 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 C7P10643 843 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 CSKP41240 450 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 TPMTP51580 245 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 NOMO3P69849 1222 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 FMO1Q01740 532 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 CENPCQ03188 943 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 FNDC3BQ53EP0 1204 aaKnown RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 EFHC1Q5JVL4 640 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 OR2I1PQ8NGU4 316 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 UCMAQ8WVF2 138 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 NT5C3BQ969T7 300 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 ALG14Q96F25 216 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 TOE1Q96GM8 510 aaKnown RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF419Q96HQ0 510 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 BTN2A3PQ96KV6 586 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 NPY6RQ99463 290 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 EDEM2Q9BV94 578 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 MAGEB5Q9BZ81 275 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
HSPG2-212ENST00000493940 SLCO3A1Q9UIG8 710 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
HSPG2-212ENST00000493940 AKAP13Q12802 2813 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 WDFY3Q8IZQ1 3526 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 CHD6Q8TD26 2715 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 LRRC10BA6NIK2 292 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 M0QYT0 321 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 GIPC1O14908 333 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 KHNYNO15037 678 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 TEX33O43247 280 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 HSF2BPO75031 334 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 DAB1O75553 588 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 CNTN5O94779 1100 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 LUC7L3O95232 432 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 GJB6O95452 261 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 DLDP09622 509 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 NOS2P35228 1153 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 FLT3P36888 993 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 STK19P49842 368 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF445P59923 1031 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 CDK17Q00537 523 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 NME3Q13232 169 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 SYCP1Q15431 976 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 TRIM61Q5EBN2 209 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 PITRM1Q5JRX3 1037 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 CXorf57Q6NSI4 855 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 FBXL22Q6P050 247 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 SASS6Q6UVJ0 657 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 C11orf74Q86VG3 221 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 SYT12Q8IV01 421 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 AHI1Q8N157 1196 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 HJURPQ8NCD3 748 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 WFIKKN2Q8TEU8 576 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 SIPA1Q96FS4 1042 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 TBCBQ99426 244 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 ANO10Q9NW15 660 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 TMEM59LQ9UK28 342 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 HS3ST4Q9Y661 456 aa13.04□□□□□ -0.32
HSPG2-212ENST00000493940 MAP1BP46821 2468 aaKnown RBP13.04□□□□□ -0.32
HSPG2-212ENST00000493940 TDRD6O60522 2096 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 TTC34A8MYJ7 566 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 NPC1O15118 1278 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 AP5Z1O43299 807 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF217O75362 1048 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 PAGE1O75459 146 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 VAV1P15498 845 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 ACSL1P33121 698 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 MATKP42679 507 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 BPIFB4P59827 614 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 RPS14P62263 151 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 MYL5Q02045 173 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 TYRO3Q06418 890 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 BYSLQ13895 437 aaKnown RBP13.03□□□□□ -0.32
HSPG2-212ENST00000493940 STARD3Q14849 445 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 STX1AQ16623 288 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
HSPG2-212ENST00000493940 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms