RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FOXN1O15353 648 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 AP1G2O75843 785 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 RECQL5O94762 991 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 FBXO21O94952 628 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ALOX5P09917 674 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 COX7A2P14406 83 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MAGEA2P43356 314 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 CD151P48509 253 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PTGES3Q15185 160 aaKnown RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 C4orf46Q504U0 113 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF621Q6ZSS3 439 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 PTAR1Q7Z6K3 402 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MB21D2Q8IYB1 491 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 TPCN2Q8NHX9 752 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SLC9A6Q92581 669 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 OXNAD1Q96HP4 312 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 SPATA5L1Q9BVQ7 753 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-221ENST00000493795 GRIP2Q9C0E4 1043 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.13
BRCA1-221ENST00000493795 MSH4O15457 936 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 MAGEB3O15480 346 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 SERPINA1P01009 418 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RB1P06400 928 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ADSSP30520 456 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 POLD2P49005 469 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 TMEM62Q0P6H9 643 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 KCNA10Q16322 511 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 PAGE2BQ5JRK9 111 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 KLHDC7AQ5VTJ3 777 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 C11orf63Q6NUN7 778 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 AKAP14Q86UN6 197 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 DAW1Q8N136 415 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CLHC1Q8NHS4 586 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 DPF2Q92785 391 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF354BQ96LW1 612 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CHCHD6Q9BRQ6 235 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RRN3P2A6NIE6 340 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 WRBO00258 174 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 MTA2O94776 668 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 UBOX5O94941 541 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 LDOC1O95751 146 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RARGP13631 454 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RPL9P32969 192 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RPL4P36578 427 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ARFIP1P53367 373 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 SMIM11AP58511 58 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CCZ1BP86790 482 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CCZ1P86791 482 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 GRSF1Q12849 480 aaKnown RBP eCLIP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CUL2Q13617 745 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 TCEA2Q15560 299 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 TRPV1Q8NER1 839 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CBWD1Q9BRT8 395 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 SLC25A23Q9BV35 468 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 IKZF3Q9UKT9 509 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 VANGL2Q9ULK5 521 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 PTCH1Q13635 1447 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 C2CD2LO14523 706 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CBFA2T3O75081 653 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 SLC25A12O75746 678 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ITGB3P05106 788 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF7P17097 686 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 YY1P25490 414 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 LRPAP1P30533 357 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CAPGP40121 348 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 USP46P62068 366 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 PRKCEQ02156 737 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 MSLNQ13421 630 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 MPP2Q14168 576 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 NR1I3Q14994 352 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 HKDC1Q2TB90 917 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 C1orf189Q5VU69 101 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 METTL16Q86W50 562 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 DSELQ8IZU8 1212 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 EMC1Q8N766 993 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 LPCAT1Q8NF37 534 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 PRCCQ92733 491 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CDK5RAP1Q96SZ6 601 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 SEMA6AQ9H2E6 1030 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 DCP1AQ9NPI6 582 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 RPS6KA6Q9UK32 745 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 L1RE1Q9UN81 338 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 PLA2G4CQ9UP65 541 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ARHGEF12Q9NZN5 1544 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ARHGEF33A8MVX0 844 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 DBTP11182 482 aaKnown RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CYP2C9P11712 490 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ZNF37AP17032 561 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ITGA2P17301 1181 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 ADSLP30566 484 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CEBPGP53567 150 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 N4BP2L1Q5TBK1 243 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-221ENST00000493795 EFCAB12Q6NXP0 572 aa8.01□□□□□ -1.13
BRCA1-221ENST00000493795 CYP2R1Q6VVX0 501 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms