RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 TUBA4AP68366 448 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 BCL2A1Q16548 175 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 TAZQ16635 292 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 RWDD4Q6NW29 188 aaKnown RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM35BQ8NCS4 154 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 COG8Q96MW5 612 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 FAM96AQ9H5X1 160 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 PIH1D1Q9NWS0 290 aaKnown RBP11.99□□□□□ -0.49
HDAC4-210ENST00000493582 BCAP29Q9UHQ4 241 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 AP4S1Q9Y587 144 aa11.99□□□□□ -0.49
HDAC4-210ENST00000493582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 INHBBP09529 407 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 GLDCP23378 1020 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 MIPP30301 263 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 ITGADQ13349 1161 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 ART3Q13508 389 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SEZ6Q53EL9 994 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 RAB6CQ53S08 254 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 AARS2Q5JTZ9 985 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 ZBTB41Q5SVQ8 909 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 WDR78Q5VTH9 848 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 AMIGO3Q86WK7 504 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 OR5B17Q8NGF7 314 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 IL31RAQ8NI17 732 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TFAP2BQ92481 460 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TANKQ92844 425 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TCHPQ9BT92 498 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 RAB6CQ9H0N0 254 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CDH19Q9H159 772 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 C20orf96Q9NUD7 363 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CNOT11Q9UKZ1 510 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SLC8A2Q9UPR5 921 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 PSAT1Q9Y617 370 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 RBBP6Q7Z6E9 1792 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 GNPATO15228 680 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SERPINB9P50453 376 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 RAB15P59190 212 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 GNA12Q03113 381 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 NR1D2Q14995 579 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 NOMO1Q15155 1222 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TIFABQ6ZNK6 161 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TMEM26Q6ZUK4 368 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SLC15A4Q8N697 577 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SCAIQ8N9R8 606 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 DLG3Q92796 817 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 NPAS2Q99743 824 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 EBNA1BP2Q99848 306 aaKnown RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 ADA2Q9NZK5 511 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SUN2Q9UH99 717 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 HTRA2O43464 458 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 NDUFB5O43674 189 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 F7P08709 466 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CDH6P55285 790 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 PMS2P3Q13401 168 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SH3PXD2AQ5TCZ1 1133 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 NIPAL1Q6NVV3 410 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 HM13Q8TCT9 377 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 TRPC4APQ8TEL6 797 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 PAK5Q9P286 719 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 CDH7Q9ULB5 785 aa11.98□□□□□ -0.49
HDAC4-210ENST00000493582 SULT1C4O75897 302 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CST3P01034 146 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 GH2P01242 217 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 MCF2P10911 925 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF182P17025 639 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 PAX3P23760 479 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 GRM5P41594 1212 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 LSM12Q3MHD2 195 aaKnown RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 PTPN20Q4JDL3 420 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 THOC7Q6I9Y2 204 aaKnown RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 ARMCX6Q7L4S7 300 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 PGAM4Q8N0Y7 254 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 TDRD5Q8NAT2 981 aaKnown RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CMASQ8NFW8 434 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 SACM1LQ9NTJ5 587 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 DCDC2Q9UHG0 476 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CNTN6Q9UQ52 1028 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CDY1Q9Y6F8 540 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 A0A087WXM4 84 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 METTL18O95568 372 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 ERBB2P04626 1255 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CCR10P46092 362 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 TTC33Q6PID6 262 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-210ENST00000493582 KCNT2Q6UVM3 1135 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 CYP2R1Q6VVX0 501 aa11.97□□□□□ -0.49
HDAC4-210ENST00000493582 ZNF534Q76KX8 674 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms