RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SNX2O60749 519 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 RFPL1O75677 317 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 BRAFP15056 766 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 ZKSCAN1P17029 563 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 TPH1P17752 444 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 CDKN2AP42771 156 aaKnown RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 PIP4K2AP48426 406 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 CPT1AP50416 773 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 GPC5P78333 572 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 TXNL4AP83876 142 aaKnown RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 SLC15A2Q16348 729 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 EARS2Q5JPH6 523 aaKnown RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 YAF2Q8IY57 180 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 HIST1H2AAQ96QV6 131 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 RTFDC1Q9BY42 306 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 C22orf23Q9BZE7 217 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 NUAK2Q9H093 628 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 ZCWPW1Q9H0M4 648 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 RIMKLBQ9ULI2 386 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 THRAP3Q9Y2W1 955 aaKnown RBP3.77□□□□□ -1.81
PTCD3-218ENST00000493430 BCL9O00512 1426 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 PSME4Q14997 1843 aa3.77□□□□□ -1.81
PTCD3-218ENST00000493430 CARMIL3Q8ND23 1372 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 PARD3Q8TEW0 1356 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 SCN9AQ15858 1988 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 TRPM7Q96QT4 1865 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 MYO5AQ9Y4I1 1855 aaKnown RBP3.76□□□□□ -1.81
PTCD3-218ENST00000493430 FAM227AF5H4B4 570 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 FRS3O43559 492 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 USP12O75317 370 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 INMTO95050 263 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 T-ENOLP0DO92 83 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 ACVR2AP27037 513 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 ANAPC15P60006 121 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 B4GALNT1Q00973 533 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 KPNB1Q14974 876 aaKnown RBP3.76□□□□□ -1.81
PTCD3-218ENST00000493430 CNGA2Q16280 664 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 C3orf38Q5JPI3 329 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 MANEAQ5SRI9 462 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 SWSAP1Q6NVH7 229 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 MZT2AQ6P582 158 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 ZNF549Q6P9A3 640 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 USP49Q70CQ1 688 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 KIAA0319LQ8IZA0 1049 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 BCAS4Q8TDM0 211 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 IGFBPL1Q8WX77 278 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 GPATCH3Q96I76 525 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 CINPQ9BW66 212 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-218ENST00000493430 CDH19Q9H159 772 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 MLXIPQ9HAP2 919 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 SEMA4BQ9NPR2 832 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-218ENST00000493430 ARL8BQ9NVJ2 186 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 DKK4Q9UBT3 224 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 SRP68Q9UHB9 627 aaKnown RBP3.76□□□□□ -1.81
PTCD3-218ENST00000493430 L1RE1Q9UN81 338 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 SRCAPQ6ZRS2 3230 aa3.76□□□□□ -1.81
PTCD3-218ENST00000493430 LTBP1Q14766 1721 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 IGSF1Q8N6C5 1336 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 IGLV5-39A0A0G2JS06 123 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 C2CD4BA6NLJ0 364 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 KCNQ3O43525 872 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 PLAUP00749 431 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 PDGFRBP09619 1106 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 U2AF1L5P0DN76 240 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 TXNP10599 105 aaKnown RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 IL6STP40189 918 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 JAK3P52333 1124 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 EIF4A1P60842 406 aaKnown RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 U2AF1Q01081 240 aaKnown RBP eCLIP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 CCDC15Q0P6D6 951 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 SLC39A6Q13433 755 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 CLCA4Q14CN2 919 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 CNN3Q15417 329 aaKnown RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 UBAP2Q5T6F2 1119 aaKnown RBP3.75□□□□□ -1.81
PTCD3-218ENST00000493430 APOA5Q6Q788 366 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 CLEC9AQ6UXN8 241 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 FAM57BQ71RH2 274 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 PIGBQ92521 554 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 NLRP4Q96MN2 994 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 SCNM1Q9BWG6 230 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 TM2D2Q9BX73 214 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 ZBTB40Q9NUA8 1239 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 TMEM45AQ9NWC5 275 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 ZIM2Q9NZV7 527 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 SEMA5BQ9P283 1151 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 DNAJB11Q9UBS4 358 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 SLC27A6Q9Y2P4 619 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 LRRC37AA6NMS7 1700 aa3.75□□□□□ -1.81
PTCD3-218ENST00000493430 CACNA1FO60840 1977 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 CGNL1Q0VF96 1302 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PCDH11XQ9BZA7 1347 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PCDH11YQ9BZA8 1340 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PXDNLA1KZ92 1463 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PRPF3O43395 683 aaKnown RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 CA12O43570 354 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PRAMEF2O60811 474 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 TMEM225BP0DP42 221 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 BTF3P20290 206 aaKnown RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 RBL1P28749 1068 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms