RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 WASH4PA8MWX3 477 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 KIF2AO00139 706 aaPredicted RBP11.91□□□□□ -0.5
LSM2-214ENST00000493387 ARNTLO00327 626 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 TRDMT1O14717 391 aaKnown RBP11.91□□□□□ -0.5
LSM2-214ENST00000493387 TSPAN3O60637 253 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 TBL1XO60907 577 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 SLC34A2O95436 690 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 RHOQP17081 205 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 EPHB2P29323 1055 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 PEX5P50542 639 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
LSM2-214ENST00000493387 CA9Q16790 459 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 ANO4Q32M45 955 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 ATP13A4Q4VNC1 1196 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 TRIM68Q6AZZ1 485 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 RFX8Q6ZV50 586 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
LSM2-214ENST00000493387 GJD3Q8N144 294 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 PYROXD2Q8N2H3 581 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 SLC35F6Q8N357 371 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 RAPGEF5Q92565 580 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 TSC1Q92574 1164 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 KRT35Q92764 455 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 ASIC4Q96FT7 647 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 ZFYVE19Q96K21 471 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 CWC15Q9P013 229 aaKnown RBP11.91□□□□□ -0.5
LSM2-214ENST00000493387 DUSP12Q9UNI6 340 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 SNX10Q9Y5X0 201 aa11.91□□□□□ -0.5
LSM2-214ENST00000493387 MYO10Q9HD67 2058 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 NEDD8-MDP1E9PL57 170 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FAM72CH0Y354 149 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 DDX3YO15523 660 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 CACNG3O60359 315 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 TYRP14679 529 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 ZFXP17010 805 aaPredicted RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 EIF2DP41214 584 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 MAPKAPK2P49137 400 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 VCPP55072 806 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 RPS24P62847 133 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 TNK2Q07912 1038 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 TFDP2Q14188 446 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 DPYSL3Q14195 570 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 PPP2R5EQ16537 467 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FAM72AQ5TYM5 149 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FYB2Q5VWT5 728 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 RNF43Q68DV7 783 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FAM72DQ6L9T8 149 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FAM72BQ86X60 149 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 SUGP1Q8IWZ8 645 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 UBALD2Q8IYN6 164 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 LZTR1Q8N653 840 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 RTL3Q8N8U3 475 aaKnown RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 IGSF8Q969P0 613 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 FAF2Q96CS3 445 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 PRICKLE1Q96MT3 831 aaPredicted RBP11.9□□□□□ -0.5
LSM2-214ENST00000493387 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 TLR10Q9BXR5 811 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 EFR3BQ9Y2G0 817 aa11.9□□□□□ -0.5
LSM2-214ENST00000493387 CTAGE9A4FU28 777 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 H0Y626 953 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
LSM2-214ENST00000493387 GOT1P17174 413 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 HOXD9P28356 352 aaPredicted RBP11.89□□□□□ -0.51
LSM2-214ENST00000493387 OR1E1P30953 314 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 GJA4P35212 333 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 PTPN7P35236 360 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 SERPINB6P35237 376 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 ETFBP38117 255 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 GGCXP38435 758 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 MARCKSL1P49006 195 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 SLC12A1Q13621 1099 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 CDH18Q13634 790 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 DPYSQ14117 519 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 TAZQ16635 292 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 TFDP3Q5H9I0 405 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 C6orf118Q5T5N4 469 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 SEL1L2Q5TEA6 688 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 MFSD7Q6UXD7 560 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 ZNF783Q6ZMS7 281 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 SPOCD1Q6ZMY3 1216 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 SETD3Q86TU7 594 aaPredicted RBP11.89□□□□□ -0.51
LSM2-214ENST00000493387 RALGPS2Q86X27 583 aaPredicted RBP11.89□□□□□ -0.51
LSM2-214ENST00000493387 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 CFAP52Q8N1V2 620 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 FIBINQ8TAL6 211 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 ALG3Q92685 438 aa11.89□□□□□ -0.51
LSM2-214ENST00000493387 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms