RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 ELOVL1Q9BW60 279 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 NDST4Q9H3R1 872 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SEC61A2Q9H9S3 476 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 TRPM5Q9NZQ8 1165 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 MPP6Q9NZW5 540 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SLCO3A1Q9UIG8 710 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 PCDHGB5Q9Y5G0 923 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 FAM169AQ9Y6X4 670 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SOS1Q07889 1333 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-212ENST00000493341 GRXCR1A8MXD5 290 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 CLGNO14967 610 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 FYB1O15117 783 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 TRIM24O15164 1050 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SPRY2O43597 315 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 ARSAP15289 507 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 PPP3CBP16298 524 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 MCM5P33992 734 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 ARL1P40616 181 aaPredicted RBP5.01□□□□□ -1.61
VPS13A-212ENST00000493341 RABGGTBP53611 331 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 UBXN2AP68543 259 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 PLIN5Q00G26 463 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 CAP1Q01518 475 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 AIMP1Q12904 312 aaKnown RBP5.01□□□□□ -1.61
VPS13A-212ENST00000493341 CRYMQ14894 314 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 CYP2A13Q16696 494 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 FAM187BQ17R55 369 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 KLHL35Q6PF15 583 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 MAVSQ7Z434 540 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 NBPF11Q86T75 865 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 VPS52Q8N1B4 723 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SCML4Q8N228 414 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 TMEM132CQ8N3T6 1108 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SOCS4Q8WXH5 440 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SMARCE1Q969G3 411 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 DCLRE1CQ96SD1 692 aaKnown RBP5.01□□□□□ -1.61
VPS13A-212ENST00000493341 HDHD5Q9BXW7 423 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 SH2D4AQ9H788 454 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 TRIM36Q9NQ86 728 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 RXFP3Q9NSD7 469 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 INTS13Q9NVM9 706 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 MTMR4Q9NYA4 1195 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 IL1RAPL1Q9NZN1 696 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 PEMTQ9UBM1 199 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 MAP3K2Q9Y2U5 619 aa5.01□□□□□ -1.61
VPS13A-212ENST00000493341 NPIPB13A6NJU9 1138 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 C3orf70A6NLC5 250 aaPredicted RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 C16orf96A6NNT2 1141 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 NPIPB5A8MRT5 1133 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 NPIPB4C9JG80 1138 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 DIRC3C9JPN6 131 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 GCOM1H8Y6P7 765 aaPredicted RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 AP4M1O00189 453 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TBCAO75347 108 aaKnown RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 PMPCBO75439 489 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 CFIP05156 583 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 CYP4B1P13584 511 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 MUTP22033 750 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 AVPR2P30518 371 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TTKP33981 857 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TNNT3P45378 269 aaPredicted RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 HHEXQ03014 270 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 MESP2Q0VG99 397 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 AP5B1Q2VPB7 878 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 ZNF667Q5HYK9 610 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 PLEKHS1Q5SXH7 462 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TREML2Q5T2D2 321 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 NAPEPLDQ6IQ20 393 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 GDF7Q7Z4P5 450 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 SGMS1Q86VZ5 419 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 LINC01356Q8N9X3 169 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TMEM116Q8NCL8 245 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 B3GALNT2Q8NCR0 500 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 GLMPQ8WWB7 406 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 ARHGEF2Q92974 986 aaKnown RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 DACT3Q96B18 629 aaPredicted RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 NACC2Q96BF6 587 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 INTS12Q96CB8 462 aaKnown RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 RSPRY1Q96DX4 576 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 JAKMIP1Q96N16 626 aaKnown RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 WDFY2Q96P53 400 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 HEMGNQ9BXL5 484 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 GPR87Q9BY21 358 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TTC12Q9H892 705 aaPredicted RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 MRPL15Q9P015 296 aaKnown RBP5□□□□□ -1.61
VPS13A-212ENST00000493341 MGAT4CQ9UBM8 478 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 NOX1Q9Y5S8 564 aa5□□□□□ -1.61
VPS13A-212ENST00000493341 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 SNAP23O00161 211 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 RFXAPO00287 272 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 UBE2CO00762 179 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CD72P21854 359 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ADRA1DP25100 572 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 MCM3P25205 808 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 GKP32189 559 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 HNRNPMP52272 730 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CDH8P55286 799 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 PPARDQ03181 441 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 DNASE1L3Q13609 305 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms