RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 TPH1P17752 444 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 C4BPBP20851 252 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 GTF2E2P29084 291 aaKnown RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 SLC9A5Q14940 896 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 RAD21L1Q9H4I0 556 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 CROTQ9UKG9 612 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 A0A096LPK6 155 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 PABPC1P11940 636 aaKnown RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 PAX3P23760 479 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 HNRNPH1P31943 449 aaKnown RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 GRK4P32298 578 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 MSLNQ13421 630 aaPredicted RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 ALFQ53S48 1182 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 TBCELQ5QJ74 424 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 ARMC12Q5T9G4 340 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 MFSD7Q6UXD7 560 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 DDHD1Q8NEL9 900 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 ATXN2LQ8WWM7 1075 aaKnown RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 MTERF3Q96E29 417 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 SH3BP4Q9P0V3 963 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 GTF2A1LQ9UNN4 478 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 LGALS2P05162 132 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 TRIM71Q2Q1W2 868 aaKnown RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
BRAT1-206ENST00000493232 KATNAL2Q8IYT4 538 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 SMPD4Q9NXE4 827 aa16.64■□□□□ 0.25
BRAT1-206ENST00000493232 A0A087X1B8 175 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 FGFR1P11362 822 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 TNNI3P19429 210 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 SCUBE3Q8IX30 993 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 PHF21BQ96EK2 531 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 POLR1EQ9GZS1 481 aaKnown RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 PORCNQ9H237 461 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 AP3M1Q9Y2T2 418 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 C15orf38-AP3S2A0A0A6YYH1 394 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 PECAM1P16284 738 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MIPP30301 263 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MMP13P45452 471 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 ALDH9A1P49189 494 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 BOP1Q14137 746 aaKnown RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 ACOX1Q15067 660 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 TRIM16LQ309B1 348 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 ARPINQ7Z6K5 226 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 TMPRSS6Q8IU80 811 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MTA2O94776 668 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 VAPBO95292 243 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 SPDYCQ5MJ68 293 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 IRAK1BP1Q5VVH5 260 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 TMEM26Q6ZUK4 368 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 NECAB2Q7Z6G3 386 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 TRAPPC12Q8WVT3 735 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 GLMNQ92990 594 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MID1IP1Q9NPA3 183 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-206ENST00000493232 MILR1Q7Z6M3 343 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 FNDC5Q8NAU1 212 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 PGLYRP2Q96PD5 576 aa16.63■□□□□ 0.25
BRAT1-206ENST00000493232 SERPINA4P29622 427 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 DEFB107AQ8IZN7 70 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 CATSPER2Q96P56 530 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 BDH2Q9BUT1 245 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 A0A088AWK7 358 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 DDX3XO00571 662 aaKnown RBP eCLIP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 RARAP10276 462 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 ZNF10P21506 573 aaPredicted RBP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 CRYMQ14894 314 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 CYP2A13Q16696 494 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 PARP6Q2NL67 630 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 CEP41Q9BYV8 373 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 NINJ2Q9NZG7 142 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 SNX8Q9Y5X2 465 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 GAKO14976 1311 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 HMGB3O15347 200 aaKnown RBP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 ITGB6P18564 788 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 NOS2P35228 1153 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 RPL21P46778 160 aaKnown RBP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 METTL6Q8TCB7 284 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 DUSP9Q99956 384 aaKnown RBP16.62■□□□□ 0.25
BRAT1-206ENST00000493232 TKTL2Q9H0I9 626 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 SATB2Q9UPW6 733 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 MSCO60682 206 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 JAK1P23458 1154 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 HLA-DQA1Q5Y7H0 255 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 RIPOR1Q6ZS17 1223 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 USP45Q70EL2 814 aa16.62■□□□□ 0.25
BRAT1-206ENST00000493232 TMC3Q7Z5M5 1100 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms