RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CNDP2Q96KP4 475 aaKnown RBP14.23□□□□□ -0.13
SAMM50-204ENST00000493161 ELF4Q99607 663 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-204ENST00000493161 ZSWIM1Q9BR11 485 aa14.23□□□□□ -0.13
SAMM50-204ENST00000493161 HESX1Q9UBX0 185 aa14.23□□□□□ -0.13
SAMM50-204ENST00000493161 USP25Q9UHP3 1055 aa14.23□□□□□ -0.13
SAMM50-204ENST00000493161 NCKAP1Q9Y2A7 1128 aa14.23□□□□□ -0.13
SAMM50-204ENST00000493161 RAI2Q9Y5P3 530 aa14.23□□□□□ -0.13
SAMM50-204ENST00000493161 EIF4E1BA6NMX2 242 aaKnown RBP14.22□□□□□ -0.13
SAMM50-204ENST00000493161 TTC34A8MYJ7 566 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 C10orf142B7Z368 130 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 ACSL4O60488 711 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 C1QL1O75973 258 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 SYKP43405 635 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 ABCG1P45844 678 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 NUMBP49757 651 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 SEMG2Q02383 582 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 LRMPQ12912 555 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 CST6Q15828 149 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 HNRNPA1L2Q32P51 320 aaKnown RBP14.22□□□□□ -0.13
SAMM50-204ENST00000493161 MPP7Q5T2T1 576 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 PMF1Q6P1K2 205 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 MSANTD2Q6P1R3 559 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 MMAAQ8IVH4 418 aaKnown RBP14.22□□□□□ -0.13
SAMM50-204ENST00000493161 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 EID2Q8N6I1 236 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 FIBINQ8TAL6 211 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 SAP25Q8TEE9 199 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 SNX21Q969T3 373 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 CNGB3Q9NQW8 809 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 AASDHPPTQ9NRN7 309 aa14.22□□□□□ -0.13
SAMM50-204ENST00000493161 COL5A1P20908 1838 aaPredicted RBP14.22□□□□□ -0.13
SAMM50-204ENST00000493161 A0A1W2PR77 199 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 DFNA5O60443 496 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 RNASEH2AO75792 299 aaKnown RBP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 LDOC1O95751 146 aaPredicted RBP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 ITGAVP06756 1048 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 JUPP14923 745 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 EIF2S3P41091 472 aaKnown RBP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 SLC11A2P49281 568 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 TBX4P57082 545 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 BNIP3Q12983 259 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 TARDBPQ13148 414 aaKnown RBP eCLIP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 EDRF1Q3B7T1 1238 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 DCAF17Q5H9S7 520 aaPredicted RBP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 KRBA2Q6ZNG9 492 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 CFAP52Q8N1V2 620 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 SCML4Q8N228 414 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 CARNMT1Q8N4J0 409 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 AADATQ8N5Z0 425 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 SLC35F5Q8WV83 523 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 FAM129BQ96TA1 746 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 GOLPH3LQ9H4A5 285 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 XPO7Q9UIA9 1087 aaKnown RBP14.21□□□□□ -0.13
SAMM50-204ENST00000493161 SLCO3A1Q9UIG8 710 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 ERVW-1Q9UQF0 538 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 PCDHGA1Q9Y5H4 931 aa14.21□□□□□ -0.13
SAMM50-204ENST00000493161 ASXL3Q9C0F0 2248 aa14.21□□□□□ -0.14
SAMM50-204ENST00000493161 FAM237AA0A1B0GTK4 181 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 E9PAM4 449 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 RNF225M0QZC1 329 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 RFPL3O75679 317 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 FYNP06241 537 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 EPB41P11171 864 aaKnown RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 VDRP11473 427 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 ABCB4P21439 1286 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 CD38P28907 300 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 SLC8A1P32418 973 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 PSMD8P48556 350 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 ACADVLP49748 655 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 METAP1P53582 386 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 ST8SIA6P61647 398 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 INAVAQ3KP66 663 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 PITRM1Q5JRX3 1037 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 HES3Q5TGS1 186 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 TCERG1LQ5VWI1 586 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 LCLAT1Q6UWP7 414 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 UNC45BQ8IWX7 931 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 APCDD1Q8J025 514 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 STK40Q8N2I9 435 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 OR2T34Q8NGX1 318 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 TSC1Q92574 1164 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 CCDC47Q96A33 483 aaKnown RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 FCRL2Q96LA5 508 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 SPATA32Q96LK8 384 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 UBL7Q96S82 380 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 OMDQ99983 421 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 NUCKS1Q9H1E3 243 aaKnown RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 PRORYQ9H606 182 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 ADAMTS1Q9UHI8 967 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 SCML1Q9UN30 329 aa14.2□□□□□ -0.14
SAMM50-204ENST00000493161 SETXQ7Z333 2677 aaKnown RBP14.2□□□□□ -0.14
SAMM50-204ENST00000493161 LRRC72A6NJI9 287 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 CETN3O15182 167 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 IRAK2O43187 625 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 STX10O60499 249 aa14.19□□□□□ -0.14
SAMM50-204ENST00000493161 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms