RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 WDR83Q9BRX9 315 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 TTLL2Q9BWV7 592 aa9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 CNOT10Q9H9A5 744 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 EIF2B3Q9NR50 452 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 SEPT10Q9P0V9 454 aa9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 KLHL8Q9P2G9 620 aaPredicted RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 AFF4Q9UHB7 1163 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 MRPL42Q9Y6G3 142 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 KIAA0100Q14667 2235 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-208ENST00000492896 E9PAM4 449 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 C2CD2LO14523 706 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CPP00450 1065 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ZDHHC11BP0C7U3 371 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SRGAP2BP0DMP2 458 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 RPL17P18621 184 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ITGB8P26012 769 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 PTPN3P26045 913 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 PPM1AP35813 382 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 GARSP41250 739 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ELK3P41970 407 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 LBX1P52954 281 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SARNPP82979 210 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CDK16Q00536 496 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ZNF33AQ06730 810 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 WASHC5Q12768 1159 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 MTA1Q13330 715 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TMED2Q15363 201 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 KLHL38Q2WGJ6 581 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TNFAIP8L3Q5GJ75 292 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 C10orf120Q5SQS8 335 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SYCP2LQ5T4T6 812 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TPGS2Q68CL5 300 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ITPRIPL1Q6GPH6 555 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 LEKR1Q6ZMV7 388 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CAPN12Q6ZSI9 719 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TMCO2Q7Z6W1 182 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TADA2BQ86TJ2 420 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TDRPQ86YL5 185 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TP53INP2Q8IXH6 220 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 PALM2Q8IXS6 379 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ZNF567Q8N184 647 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 ATPAF2Q8N5M1 289 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CDK5RAP1Q96SZ6 601 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 YME1L1Q96TA2 773 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SELENOSQ9BQE4 189 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CLSTN3Q9BQT9 956 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 UBE2OQ9C0C9 1292 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 IL23AQ9NPF7 189 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SPG21Q9NZD8 308 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 MARCH2Q9P0N8 246 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 IGSF9Q9P2J2 1179 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 HSFX1Q9UBD0 423 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CTNNAL1Q9UBT7 734 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 FETUBQ9UGM5 382 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC12A6Q9UHW9 1150 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 NR2E3Q9Y5X4 410 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 TEX264Q9Y6I9 313 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 BRCA2P51587 3418 aa9.4□□□□□ -0.9
SMARCC1-208ENST00000492896 CHD5Q8TDI0 1954 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 SLC12A8A0AV02 714 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 POC1B-GALNT4F8VUJ3 575 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 TLR5O60602 858 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 IGLV3-27P01718 113 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 ACRP10323 421 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 PSMB4P28070 264 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 SSTR1P30872 391 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 MDH1P40925 334 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 TUBP50607 506 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 KPNA1P52294 538 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 GPX6P59796 221 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 IFI35P80217 286 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 NR1H3Q13133 447 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 FAM182AQ5T1J6 154 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 ACBD5Q5T8D3 534 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 PIK3R6Q5UE93 754 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 ZNF534Q76KX8 674 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 DDX53Q86TM3 631 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 CAND1Q86VP6 1230 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 LRRC39Q96DD0 335 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 CELF6Q96J87 481 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 BTN2A3PQ96KV6 586 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 C1orf74Q96LT6 269 aa9.39□□□□□ -0.91
SMARCC1-208ENST00000492896 VAT1Q99536 393 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms