RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 KCNU1A8MYU2 1149 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 I6L893 689 aaPredicted RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 TIMM44O43615 452 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 DAB1O75553 588 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 ITPKAP23677 461 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 JAM2P57087 298 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 RNASE9P60153 205 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 RPL6Q02878 288 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 ARID5AQ03989 594 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 NME3Q13232 169 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 FNDC3BQ53EP0 1204 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 XYLT1Q86Y38 959 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 SLC41A1Q8IVJ1 513 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 AHI1Q8N157 1196 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 TMEM35BQ8NCS4 154 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 CPA5Q8WXQ8 436 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 BTN2A3PQ96KV6 586 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 RTKNQ9BST9 563 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 PRDM16Q9HAZ2 1276 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.2□□□□□ -0.46
MDC1-207ENST00000492462 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
MDC1-207ENST00000492462 ASCC3Q8N3C0 2202 aaKnown RBP12.2□□□□□ -0.46
MDC1-207ENST00000492462 KNL1Q8NG31 2342 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 LNP1A1A4G5 178 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 GOLGA8SH3BPF8 625 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 M0QYT0 321 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 NPC1O15118 1278 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 ZBTB24O43167 697 aaPredicted RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 LUC7L3O95232 432 aaKnown RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 ZIC2O95409 532 aaPredicted RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 DLDP09622 509 aaKnown RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 POLR2EP19388 210 aaKnown RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 NOS2P35228 1153 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 SOX5P35711 763 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 FLT3P36888 993 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 CSKP41240 450 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 CTSOP43234 321 aaPredicted RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 GABRB2P47870 512 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 NOMO3P69849 1222 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 IRX4P78413 519 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 CENPCQ03188 943 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 CAMK2GQ13555 558 aaPredicted RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 CDH18Q13634 790 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 STPG1Q5TH74 334 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 LYSMD4Q5XG99 296 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 ZNF397Q8NF99 534 aaPredicted RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 RNF34Q969K3 372 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 C18orf8Q96DM3 657 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 MYO19Q96H55 970 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 MRGPRX3Q96LB0 322 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 PCDHB18PQ96TA0 734 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 NPY6RQ99463 290 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 EDEM2Q9BV94 578 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 PRSS16Q9NQE7 514 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 FSCN3Q9NQT6 498 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 TMPRSS4Q9NRS4 437 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 PIGVQ9NUD9 493 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 USP36Q9P275 1121 aaKnown RBP12.19□□□□□ -0.46
MDC1-207ENST00000492462 CACNA1EQ15878 2313 aa12.19□□□□□ -0.46
MDC1-207ENST00000492462 LRRC10BA6NIK2 292 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 F5H5T6 163 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TM4SF5O14894 197 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 FOXD2O60548 495 aaPredicted RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 ZNF217O75362 1048 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 PAGE1O75459 146 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 ADCY5O95622 1261 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TPM2P07951 284 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 CCR1P32246 355 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 MATKP42679 507 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 SULT1E1P49888 294 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 TPMTP51580 245 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 LIMK1P53667 647 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 FMO1Q01740 532 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 UBXN1Q04323 297 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 ZNF33AQ06730 810 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 AUHQ13825 339 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 RAB6CQ53S08 254 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 PITRM1Q5JRX3 1037 aa12.18□□□□□ -0.46
MDC1-207ENST00000492462 FAM102AQ5T9C2 384 aaPredicted RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 CAVIN1Q6NZI2 390 aaKnown RBP12.18□□□□□ -0.46
MDC1-207ENST00000492462 FBXL22Q6P050 247 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms