RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PEAR1Q5VY43 1037 aaPredicted RBP28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 DEFB119Q8N690 84 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 FOXJ1Q92949 421 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 ZNF419Q96HQ0 510 aaPredicted RBP28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 PRMT1Q99873 361 aaKnown RBP28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 NUSAP1Q9BXS6 441 aaKnown RBP28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 CD93Q9NPY3 652 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 TMEM74BQ9NUR3 256 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 TMEM51Q9NW97 253 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 SUN2Q9UH99 717 aa28.04■■■□□ 2.08
SH3GL3-204ENST00000492099 MED19A0JLT2 244 aaPredicted RBP28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 PATE3B3GLJ2 98 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 MOCS3O95396 460 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 OXTRP30559 389 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 ST8SIA6P61647 398 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 IRX4P78413 519 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 NME3Q13232 169 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 TRIM61Q5EBN2 209 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 RABGAP1LQ5R372 815 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 RABEPKQ7Z6M1 372 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 CEP76Q8TAP6 659 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 INTS6Q9UL03 887 aaKnown RBP28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 STAP1Q9ULZ2 295 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 SIK3Q9Y2K2 1263 aa28.03■■■□□ 2.08
SH3GL3-204ENST00000492099 LGALS16A8MUM7 142 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 M0QYT0 321 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 GFPT2O94808 682 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 MMEP08473 750 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 SOX5P35711 763 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 CSKP41240 450 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 TPMTP51580 245 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 RNASE9P60153 205 aaKnown RBP28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 TYRO3Q06418 890 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 FSCBQ5H9T9 825 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 KDM1BQ8NB78 822 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 TOE1Q96GM8 510 aaKnown RBP28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 SPAG5Q96R06 1193 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 NPY6RQ99463 290 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 NAT10Q9H0A0 1025 aaKnown RBP28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 NLRC4Q9NPP4 1024 aa28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 WSB2Q9NYS7 404 aaPredicted RBP28.02■■■□□ 2.08
SH3GL3-204ENST00000492099 CKAP5Q14008 2032 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 TM4SF5O14894 197 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 IGLV3-19P01714 112 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 C7P10643 843 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 ZNF18P17022 549 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 JAM2P57087 298 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 NOMO3P69849 1222 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 SLC12A1Q13621 1099 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 SYCP1Q15431 976 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 DUOXA1Q1HG43 343 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 PITRM1Q5JRX3 1037 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 SYCP2LQ5T4T6 812 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 FAM102AQ5T9C2 384 aaPredicted RBP28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 SLC23A3Q6PIS1 610 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 XYLT1Q86Y38 959 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 SLC41A1Q8IVJ1 513 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 PCMTD1Q96MG8 357 aaPredicted RBP28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 HSPA12BQ96MM6 686 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 NUP58Q9BVL2 599 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 TMEM63CQ9P1W3 806 aa28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 NOCTQ9UK39 431 aaKnown RBP28.01■■■□□ 2.07
SH3GL3-204ENST00000492099 ATXN2Q99700 1313 aaKnown RBP28■■■□□ 2.07
SH3GL3-204ENST00000492099 EPHB6O15197 1021 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 F9P00740 461 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 STAT1P42224 750 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 OXCT1P55809 520 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 CDR2Q01850 454 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 UBXN1Q04323 297 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 NCAPHQ15003 741 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 MMS22LQ6ZRQ5 1243 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 SND1Q7KZF4 910 aaKnown RBP eCLIP28■■■□□ 2.07
SH3GL3-204ENST00000492099 ZNF366Q8N895 744 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 CADM4Q8NFZ8 388 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 NEK11Q8NG66 645 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 CPA5Q8WXQ8 436 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 NT5C3BQ969T7 300 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 PGAP3Q96FM1 320 aaPredicted RBP28■■■□□ 2.07
SH3GL3-204ENST00000492099 WDCPQ9H6R7 721 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 TMEM9BQ9NQ34 198 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 PRSS16Q9NQE7 514 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 PAXBP1Q9Y5B6 917 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 GON4LQ3T8J9 2241 aa28■■■□□ 2.07
SH3GL3-204ENST00000492099 A0A1B0GVM2 712 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 TCAF2A6NFQ2 919 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 C4orf47A7E2U8 309 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 SRPRAP08240 638 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 ZBTB16Q05516 673 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 PPM1JQ5JR12 505 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 BRMS1LQ5PSV4 323 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 DAB2IPQ5VWQ8 1189 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 NAA35Q5VZE5 725 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 FBXL22Q6P050 247 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 CCAR2Q8N163 923 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 MYO19Q96H55 970 aa27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 RPRD1AQ96P16 312 aaPredicted RBP27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 TNRC6BQ9UPQ9 1833 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-204ENST00000492099 CXCR3P49682 368 aa27.98■■■□□ 2.07
SH3GL3-204ENST00000492099 SULT1E1P49888 294 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms