RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FZD4Q9ULV1 537 aa14.42□□□□□ -0.1
ATG4B-222ENST00000491867 MTMR6Q9Y217 621 aa14.42□□□□□ -0.1
ATG4B-222ENST00000491867 A0A1W2PNU3 283 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-222ENST00000491867 FFAR2O15552 330 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 TGFB1I1O43294 461 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 STX6O43752 255 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 P4HA1P13674 534 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 RBMS1P29558 406 aaKnown RBP14.41□□□□□ -0.1
ATG4B-222ENST00000491867 SLC8A1P32418 973 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 CD70P32970 193 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 NASPP49321 788 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-222ENST00000491867 ADPRHP54922 357 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 PPP2CBP62714 309 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 PPP2CAP67775 309 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 SKOR1P84550 965 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 C3orf38Q5JPI3 329 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 OR14C36Q8NHC7 312 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 WFDC5Q8TCV5 224 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 PLEKHO2Q8TD55 490 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 PLD4Q96BZ4 506 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 CYFIP2Q96F07 1278 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 STARD5Q9NSY2 213 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 SATB2Q9UPW6 733 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 USP3Q9Y6I4 520 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 DOCK9Q9BZ29 2069 aa14.41□□□□□ -0.1
ATG4B-222ENST00000491867 LATO43561 262 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 VNN1O95497 513 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 CKMT1AP12532 417 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 GP1BBP13224 206 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 MYF5P13349 255 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 GOT1P17174 413 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 DGKAP23743 735 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 PSMD8P48556 350 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 HARS2P49590 506 aaKnown RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ST8SIA6P61647 398 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 TRIP4Q15650 581 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 E2F4Q16254 413 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 HNRNPA1L2Q32P51 320 aaKnown RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ZSCAN23Q3MJ62 389 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ARL13BQ3SXY8 428 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 C9orf64Q5T6V5 341 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 IGF2-ASQ6U949 168 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 IQCHQ86VS3 1027 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 AADATQ8N5Z0 425 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 OR4C6Q8NH72 309 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 CCDC97Q96F63 343 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 MYO19Q96H55 970 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 INTS4Q96HW7 963 aaKnown RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 SLC46A1Q96NT5 459 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 TWNKQ96RR1 684 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ABCG4Q9H172 646 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ZSCAN16Q9H4T2 348 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 UCKL1Q9NWZ5 548 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
ATG4B-222ENST00000491867 DOPEY1Q5JWR5 2465 aa14.4□□□□□ -0.1
ATG4B-222ENST00000491867 ICE1Q9Y2F5 2266 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3DA0A087WVF3 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3IA0A087WXS9 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3EA0A087X179 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3KA0A087X1G2 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3FA6NER0 549 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3LB9A6J9 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 EIF3DO15371 548 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 SUV39H1O43463 412 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3HP0C7X1 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TRIM21P19474 475 aaKnown RBP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 SGSHP51688 502 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 ASIC1P78348 528 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 OVGP1Q12889 678 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 CLN3Q13286 438 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 ISXQ2M1V0 245 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 LINC00303Q3SY05 128 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3GQ6DHY5 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3CQ6IPX1 549 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 SND1Q7KZF4 910 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 EPM2AIP1Q7L775 607 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 NELFCDQ8IXH7 590 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 TBC1D3Q8IZP1 549 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-222ENST00000491867 ARHGAP18Q8N392 663 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 LRRC27Q9C0I9 530 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 KBTBD4Q9NVX7 518 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 RP1P56715 2156 aa14.39□□□□□ -0.11
ATG4B-222ENST00000491867 LRRIQ3A6PVS8 624 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-222ENST00000491867 AFPP02771 609 aaKnown RBP14.38□□□□□ -0.11
ATG4B-222ENST00000491867 C4BPAP04003 597 aaKnown RBP14.38□□□□□ -0.11
ATG4B-222ENST00000491867 MAT2AP31153 395 aaKnown RBP14.38□□□□□ -0.11
ATG4B-222ENST00000491867 ASPAP45381 313 aa14.38□□□□□ -0.11
ATG4B-222ENST00000491867 ZNF445P59923 1031 aa14.38□□□□□ -0.11
ATG4B-222ENST00000491867 YWHAGP61981 247 aaKnown RBP eCLIP14.38□□□□□ -0.11
ATG4B-222ENST00000491867 STK38Q15208 465 aa14.38□□□□□ -0.11
ATG4B-222ENST00000491867 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
ATG4B-222ENST00000491867 SPOPLQ6IQ16 392 aa14.38□□□□□ -0.11
ATG4B-222ENST00000491867 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms