RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 JAM2P57087 298 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 UBXN2BQ14CS0 331 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 QPCTQ16769 361 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ITPRIPL2Q3MIP1 535 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 LACTB2Q53H82 288 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 C10orf120Q5SQS8 335 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ADGRG2Q8IZP9 1017 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SCML4Q8N228 414 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ZNF276Q8N554 614 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 ANKS4BQ8N8V4 417 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 DDX1Q92499 740 aaKnown RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FAM3CQ92520 227 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 EDEM1Q92611 657 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CENPTQ96BT3 561 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CHMP6Q96FZ7 201 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SHDQ96IW2 340 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 HSFY1Q96LI6 401 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SLC4A5Q9BY07 1137 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 MIS12Q9H081 205 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CD248Q9HCU0 757 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CLIC5Q9NZA1 410 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 CNOT8Q9UFF9 292 aaKnown RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 NDRG2Q9UN36 371 aaKnown RBP9.75□□□□□ -0.85
BRCA1-219ENST00000491747 PCDHGC3Q9UN70 934 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 SIT1Q9Y3P8 196 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 KIAA1549LQ6ZVL6 1849 aa9.75□□□□□ -0.85
BRCA1-219ENST00000491747 FGGP02679 453 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CYP11B1P15538 503 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CTHP32929 405 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 MLLT6P55198 1093 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 BYSLQ13895 437 aaKnown RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PDGFRLQ15198 375 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 GAB4Q2WGN9 574 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PREPLQ4J6C6 727 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 BSPRYQ5W0U4 402 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 ZNF852Q6ZMS4 543 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 NOP9Q86U38 636 aaKnown RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PARP9Q8IXQ6 854 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 SIX6OS1Q8N1H7 587 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 MAGEC3Q8TD91 643 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CARD9Q9H257 536 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 DPH5Q9H2P9 285 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 ECT2Q9H8V3 914 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 FBRSL1Q9HCM7 1045 aaKnown RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CNGB3Q9NQW8 809 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 ATP8A1Q9Y2Q0 1164 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 E5RJQ4 531 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 DDX3XO00571 662 aaKnown RBP eCLIP9.74□□□□□ -0.851e-8■■■□□ 17.6
BRCA1-219ENST00000491747 FYNP06241 537 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 RALAP11233 206 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 RFX1P22670 979 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 SCTRP47872 440 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 IFNAR2P48551 515 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 XRCC4Q13426 336 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PON2Q15165 354 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 KLHDC10Q6PID8 442 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CROCCP2Q86T23 111 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 MIB1Q86YT6 1006 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 BBS7Q8IWZ6 715 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PRSS33Q8NF86 280 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 RFFLQ8WZ73 363 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 TLCD1Q96CP7 247 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 PIWIL1Q96J94 861 aaKnown RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 CPXM1Q96SM3 734 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 NACA2Q9H009 215 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 C8orf33Q9H7E9 229 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-219ENST00000491747 RASAL2Q9UJF2 1139 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 ZDBF2Q9HCK1 2354 aa9.74□□□□□ -0.85
BRCA1-219ENST00000491747 E2F8A0AVK6 867 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 PAPSS1O43252 624 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 STC2O76061 302 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 KLKB1P03952 638 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 NUDT17P0C025 328 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 GJA4P35212 333 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 GALCP54803 685 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 DR1Q01658 176 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 WLSQ5T9L3 541 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 BTBD8Q5XKL5 378 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 TMEM110Q86TL2 294 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 RALGPS2Q86X27 583 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 ARHGAP18Q8N392 663 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 STK32AQ8WU08 396 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SLC20A1Q8WUM9 679 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CTNNBL1Q8WYA6 563 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 P2RY11Q96G91 374 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 XPO6Q96QU8 1125 aaKnown RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 LHX5Q9H2C1 402 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SFMBT1Q9UHJ3 866 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 ATG2BQ96BY7 2078 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 FAM187AA6NFU0 413 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 MAN2B1O00754 1011 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 BUB1BO60566 1050 aaPredicted RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CYP17A1P05093 508 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms