RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 GPATCH2LQ9NWQ4 482 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 MPP6Q9NZW5 540 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 OR12D3Q9UGF7 316 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 GGA2Q9UJY4 613 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 FZD10Q9ULW2 581 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 SLC27A6Q9Y2P4 619 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 PCDHA13Q9Y5I0 950 aa20.19■□□□□ 0.82
SEC22A-209ENST00000491366 A0A0A0MRY4 1105 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 A0A1B0GVM2 712 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 TCAF2A6NFQ2 919 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 EIF3CLB5ME19 914 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FAM72CH0Y354 149 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 PRPSAP2O60256 369 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 LRCH4O75427 683 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 CNTN5O94779 1100 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 IPO7O95373 1038 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 PABPC1P11940 636 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 CD70P32970 193 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 SSR1P43307 286 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 MRE11P49959 708 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 SCAPQ12770 1279 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 LMAN2Q12907 356 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FSCBQ5H9T9 825 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 ACBD5Q5T8D3 534 aaPredicted RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FAM72AQ5TYM5 149 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 RNF43Q68DV7 783 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FAM72DQ6L9T8 149 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FAM72BQ86X60 149 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 ZNF683Q8IZ20 524 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 PYROXD2Q8N2H3 581 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 CCDC26Q8TAB7 109 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 FIBINQ8TAL6 211 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 SLC35G2Q8TBE7 412 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 USP33Q8TEY7 942 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 PEBP4Q96S96 227 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 EIF3CQ99613 913 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 CIPCQ9C0C6 399 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 OSBPL2Q9H1P3 480 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 LUC7LQ9NQ29 371 aaKnown RBP20.18■□□□□ 0.82
SEC22A-209ENST00000491366 INTUQ9ULD6 942 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 TFR2Q9UP52 801 aa20.18■□□□□ 0.82
SEC22A-209ENST00000491366 ZDBF2Q9HCK1 2354 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 TCF4P15884 667 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 NUMBP49757 651 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 ALFQ53S48 1182 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 RWDD4Q6NW29 188 aaKnown RBP20.17■□□□□ 0.82
SEC22A-209ENST00000491366 CHST9Q7L1S5 443 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 TFAP2DQ7Z6R9 452 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 CCDC33Q8N5R6 958 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 ALLCQ8N6M5 410 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 ZNF557Q8N988 423 aaPredicted RBP20.17■□□□□ 0.82
SEC22A-209ENST00000491366 ACRBPQ8NEB7 543 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 RFFLQ8WZ73 363 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 POLR3BQ9NW08 1133 aaPredicted RBP20.17■□□□□ 0.82
SEC22A-209ENST00000491366 C2orf42Q9NWW7 574 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 USP18Q9UMW8 372 aa20.17■□□□□ 0.82
SEC22A-209ENST00000491366 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 DRGXA6NNA5 263 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 CREB3O43889 395 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 CLDN11O75508 207 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 KLF8O95600 359 aaPredicted RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 KIR2DL1P43626 348 aaPredicted RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 AIF1P55008 147 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 CDH4P55283 916 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 ZNF177Q13360 481 aaPredicted RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 ACAP1Q15027 740 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 C5orf22Q49AR2 442 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 EGFLAMQ63HQ2 1017 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 CPNE8Q86YQ8 564 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 C1orf210Q8IVY1 113 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 RHOT2Q8IXI1 618 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 AHI1Q8N157 1196 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 SPEM1Q8N4L4 309 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 ZNF513Q8N8E2 541 aaPredicted RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 NIPA2Q8N8Q9 360 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 WFIKKN2Q8TEU8 576 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 NCAPGQ9BPX3 1015 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 IER2Q9BTL4 223 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 SNRNP25Q9BV90 132 aaKnown RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 ZYG11BQ9C0D3 744 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 DHX35Q9H5Z1 703 aaKnown RBP20.16■□□□□ 0.82
SEC22A-209ENST00000491366 ZWILCHQ9H900 591 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 AP4E1Q9UPM8 1137 aa20.16■□□□□ 0.82
SEC22A-209ENST00000491366 IGLV3-10A0A075B6K4 115 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 LAMTOR5O43504 91 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 GALR2O43603 387 aaPredicted RBP20.15■□□□□ 0.82
SEC22A-209ENST00000491366 ATG13O75143 517 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 LRIG2O94898 1065 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 PROSCO94903 275 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 PCK1P35558 622 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 CSKP41240 450 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 WASP42768 502 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 MRPS21P82921 87 aaKnown RBP20.15■□□□□ 0.82
SEC22A-209ENST00000491366 SATB1Q01826 763 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 NRG1Q02297 640 aaPredicted RBP20.15■□□□□ 0.82
SEC22A-209ENST00000491366 MESDQ14696 234 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 CA9Q16790 459 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 FUT11Q495W5 492 aa20.15■□□□□ 0.82
SEC22A-209ENST00000491366 ERMARDQ5T6L9 678 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms