RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 MT-ND1P03886 318 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 TFAP2AP05549 437 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 CA9Q16790 459 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PERM1Q5SV97 790 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 STRIP1Q5VSL9 837 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 GK5Q6ZS86 529 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PAF1Q8N7H5 531 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 FBXL8Q96CD0 374 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 APBA2Q99767 749 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 B3GNT5Q9BYG0 378 aa10.06□□□□□ -0.8
ERCC3-208ENST00000491292 PHRF1Q9P1Y6 1649 aaKnown RBP10.06□□□□□ -0.8
ERCC3-208ENST00000491292 TRDMT1O14717 391 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 CLIC3O95833 236 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 EIF4BP23588 611 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 MPP3Q13368 585 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 GOLGA7BQ2TAP0 167 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ARCQ7LC44 396 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 PARP8Q8N3A8 854 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ACTRT2Q8TDY3 377 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 TRAPPC12Q8WVT3 735 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 SNRNP25Q9BV90 132 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 POPDC2Q9HBU9 364 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 PXMP2Q9NR77 195 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 COPG2Q9UBF2 871 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 PAPSS1O43252 624 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 CDK4P11802 303 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 AOC1P19801 751 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 CARTPTQ16568 116 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 IL23RQ5VWK5 629 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 EXOC8Q8IYI6 725 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 OR52K1Q8NGK4 314 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 GRIN3AQ8TCU5 1115 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 CHST12Q9NRB3 414 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 TRNAU1APQ9NX07 287 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 FNDC3AQ9Y2H6 1198 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 UBIAD1Q9Y5Z9 338 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 SPATA31A6Q5VVP1 1343 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ZBTB14O43829 449 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ASS1P00966 412 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 HSPA8P11142 646 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 TRIM16LQ309B1 348 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 FUT11Q495W5 492 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 OTUD3Q5T2D3 398 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 AFAP1L2Q8N4X5 818 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 CCDC28BQ9BUN5 200 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ZNF518BQ9C0D4 1074 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 SNX15Q9NRS6 342 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 ZNF70Q9UC06 446 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-208ENST00000491292 HMGXB4Q9UGU5 601 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 EGFL7Q9UHF1 273 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 AKT3Q9Y243 479 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 GLI3P10071 1580 aa10.05□□□□□ -0.8
ERCC3-208ENST00000491292 RGSL1A5PLK6 1076 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 DHRS4L1P0CG22 281 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 IMPDH2P12268 514 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PSMB4P28070 264 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GRIA3P42263 894 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 IRF9Q00978 393 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 MAPK11Q15759 364 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 BOLA3Q53S33 107 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 C15orf52Q6ZUT6 534 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 OFCC1Q8IZS5 231 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PHF21BQ96EK2 531 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 BTBD9Q96Q07 612 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 NMRAL1Q9HBL8 299 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SORCS3Q9UPU3 1222 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SPATA31A5Q5VU36 1347 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 SPATA31A7Q8IWB4 1347 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 MYH9P35579 1960 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 KCNU1A8MYU2 1149 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 BIRC5O15392 142 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 VAPBO95292 243 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 STAT5BP51692 787 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 NUP107P57740 925 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CDKL1Q00532 357 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ITKQ08881 620 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PLCL1Q15111 1095 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 LSM12Q3MHD2 195 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 ZIK1Q3SY52 487 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 UGT2A3Q6UWM9 527 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 FAM183BPQ6ZVS7 135 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CHST15Q7LFX5 561 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 GABPB2Q8TAK5 448 aaPredicted RBP10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
ERCC3-208ENST00000491292 PRICKLE1Q96MT3 831 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms