RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 NUP205Q92621 2012 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 SYNJ2BP-COX16A0A087WUM0 186 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 A0A1B0GTH6 734 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 SYNCRIPO60506 623 aaKnown RBP15.72■□□□□ 0.11
COL27A1-206ENST00000490831 ASLP04424 464 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 TFE3P19532 575 aaPredicted RBP15.72■□□□□ 0.11
COL27A1-206ENST00000490831 FLT3P36888 993 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 CENPCQ03188 943 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 ARID5AQ03989 594 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 PTP4A2Q12974 167 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 NME3Q13232 169 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 CDH18Q13634 790 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 PUM1Q14671 1186 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL27A1-206ENST00000490831 RSPO4Q2I0M5 234 aaPredicted RBP15.72■□□□□ 0.11
COL27A1-206ENST00000490831 C2CD6Q53TS8 623 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 FSCBQ5H9T9 825 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 RABGAP1LQ5R372 815 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 FBXL22Q6P050 247 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 CARNMT1Q8N4J0 409 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 NETO1Q8TDF5 533 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 CYB5D2Q8WUJ1 264 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 RNF34Q969K3 372 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 MYO19Q96H55 970 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 PCDHB18PQ96TA0 734 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 SLC6A17Q9H1V8 727 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 FBRSQ9HAH7 460 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 COX16Q9P0S2 106 aa15.72■□□□□ 0.11
COL27A1-206ENST00000490831 KIAA1522Q9P206 1035 aaPredicted RBP15.72■□□□□ 0.11
COL27A1-206ENST00000490831 CACNA1AO00555 2505 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 TNRC6BQ9UPQ9 1833 aaKnown RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 A0A1B0GVM2 712 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 A0A1W2PQC6 194 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 SYCE3A1L190 88 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 TCAF2A6NFQ2 919 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 I6L893 689 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PAGE1O75459 146 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 ENDOD1O94919 500 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 CAVIN2O95810 425 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 IGLV3-19P01714 112 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 EPHX1P07099 455 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 CSKP41240 450 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 SULT1E1P49888 294 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PLK1P53350 603 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 LIMK1P53667 647 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 RNASE9P60153 205 aaKnown RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 CREB5Q02930 508 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 SLC12A1Q13621 1099 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 AUHQ13825 339 aaKnown RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 ARID5BQ14865 1188 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 FNDC3BQ53EP0 1204 aaKnown RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PITRM1Q5JRX3 1037 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 ACBD5Q5T8D3 534 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PEAR1Q5VY43 1037 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 MMS22LQ6ZRQ5 1243 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 CCDC117Q8IWD4 279 aaPredicted RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 CCAR2Q8N163 923 aaKnown RBP15.71■□□□□ 0.11
COL27A1-206ENST00000490831 OR2T3Q8NH03 318 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 BAP1Q92560 729 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 MRGPRX3Q96LB0 322 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 TBCBQ99426 244 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 SYT11Q9BT88 431 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 WDCPQ9H6R7 721 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PRDM16Q9HAZ2 1276 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 ANLNQ9NQW6 1124 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 ITM2CQ9NQX7 267 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 PAXBP1Q9Y5B6 917 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 HS3ST4Q9Y661 456 aa15.71■□□□□ 0.11
COL27A1-206ENST00000490831 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 H0Y626 953 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 GOLGA8SH3BPF8 625 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 MAP3K13O43283 966 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 AP5Z1O43299 807 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 ADCY5O95622 1261 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CCDC172P0C7W6 258 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 HLA-EP13747 358 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 FERP16591 822 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 DPP6P42658 865 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 PTGER3P43115 390 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 DHPSP49366 369 aaPredicted RBP15.7■□□□□ 0.1
COL27A1-206ENST00000490831 OXCT1P55809 520 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 DEUP1Q05D60 604 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 SF3A2Q15428 464 aaKnown RBP15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CCDC6Q16204 474 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CLEC16AQ2KHT3 1053 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 PLEKHG6Q3KR16 790 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 FILIP1LQ4L180 1135 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 ARTNQ5T4W7 220 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CXorf57Q6NSI4 855 aaKnown RBP15.7■□□□□ 0.1
COL27A1-206ENST00000490831 ERMP1Q7Z2K6 904 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 IRF2BP2Q7Z5L9 587 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 PHF13Q86YI8 300 aaPredicted RBP15.7■□□□□ 0.1
COL27A1-206ENST00000490831 TMPRSS6Q8IU80 811 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 TMEFF1Q8IYR6 380 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 ZNF683Q8IZ20 524 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 SLC30A5Q8TAD4 765 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 IGSF8Q969P0 613 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 ERLEC1Q96DZ1 483 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 SIPA1Q96FS4 1042 aa15.7■□□□□ 0.1
COL27A1-206ENST00000490831 C1orf74Q96LT6 269 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms