RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GJB1P08034 283 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 HMOX2P30519 316 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 RPL14P50914 215 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 BFSP2Q13515 415 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 UGP2Q16851 508 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 ADCK1Q86TW2 530 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 SLC35B2Q8TB61 432 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 TMEM216Q9P0N5 145 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 C6orf203Q9P0P8 240 aaPredicted RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 STMN1P16949 149 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 GRIA4P48058 902 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 PERM1Q5SV97 790 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 IER5Q5VY09 327 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 SH3BP5LQ7L8J4 393 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 DSELQ8IZU8 1212 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 POLR1BQ9H9Y6 1135 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 DMTF1Q9Y222 760 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 H3BSA7 217 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 ERBB2P04626 1255 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 HSPA1AP0DMV8 641 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 HSPA1BP0DMV9 641 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 ATICP31939 592 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 CRHR1P34998 444 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 TSPY1Q01534 308 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 MPZL3Q6UWV2 235 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 C4orf22Q6V702 233 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 AZIN2Q96A70 460 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 SKA1Q96BD8 255 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 HSPBAP1Q96EW2 488 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 SSU72Q9NP77 194 aaKnown RBP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 SNX15Q9NRS6 342 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHOX2-205ENST00000490689 UBIAD1Q9Y5Z9 338 aa13.12□□□□□ -0.31
SHOX2-205ENST00000490689 STX16-NPEPL1H3BU86 382 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 BIRC5O15392 142 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 DDHD2O94830 711 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 VAPBO95292 243 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 TRPC1P48995 793 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PSME3P61289 254 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 LAMTOR4Q0VGL1 99 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 ZIK1Q3SY52 487 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 KBTBD2Q8IY47 623 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 LRRC39Q96DD0 335 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PLEKHG4BQ96PX9 1271 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF862O60290 1169 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 TIPRLO75663 272 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 BAIAP3O94812 1187 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 ESRRBO95718 433 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 BCL10O95999 233 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PGAM1P18669 254 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PTPN7P35236 360 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 IDH3AP50213 366 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 NOMO1Q15155 1222 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 FRMD7Q6ZUT3 714 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 LZICQ8WZA0 190 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 APBB2Q92870 758 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 ACE2Q9BYF1 805 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 B3GNT5Q9BYG0 378 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 EGFL7Q9UHF1 273 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 DAPK2Q9UIK4 370 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 HDAC3O15379 428 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 TMEM198Q66K66 360 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PPHLN1Q8NEY8 458 aaKnown RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 URGCPQ8TCY9 931 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
SHOX2-205ENST00000490689 CERS2Q96G23 380 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 SELENONQ9NZV5 590 aa13.11□□□□□ -0.31
SHOX2-205ENST00000490689 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms