RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZBTB16Q05516 673 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 EIF4EBP2Q13542 120 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-207ENST00000490609 E2F5Q15329 346 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 SHBQ15464 509 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 C9orf64Q5T6V5 341 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 SYPL2Q5VXT5 272 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 RHBDD1Q8TEB9 315 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 SNX19Q92543 992 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 KREMEN1Q96MU8 473 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 FAM129BQ96TA1 746 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 IRX2Q9BZI1 471 aaPredicted RBP16.15■□□□□ 0.18
COL2A1-207ENST00000490609 BTBD1Q9H0C5 482 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
COL2A1-207ENST00000490609 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 NAALADL1Q9UQQ1 740 aa16.15■□□□□ 0.18
COL2A1-207ENST00000490609 SETXQ7Z333 2677 aaKnown RBP16.15■□□□□ 0.18
COL2A1-207ENST00000490609 FLRT2O43155 660 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 FSBPO95073 299 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
COL2A1-207ENST00000490609 GPD2P43304 727 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 GALCP54803 685 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 TBX4P57082 545 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 ARID5AQ03989 594 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 ARID5BQ14865 1188 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 HNRNPA1L2Q32P51 320 aaKnown RBP16.14■□□□□ 0.17
COL2A1-207ENST00000490609 PRAMEF14Q5SWL7 426 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 ISM2Q6H9L7 571 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 RRAGAQ7L523 313 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 SCUBE3Q8IX30 993 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 CFAP52Q8N1V2 620 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 DQX1Q8TE96 717 aaKnown RBP16.14■□□□□ 0.17
COL2A1-207ENST00000490609 IGSF8Q969P0 613 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 HSFY1Q96LI6 401 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 PABPC3Q9H361 631 aaKnown RBP16.14■□□□□ 0.17
COL2A1-207ENST00000490609 STIM2Q9P246 746 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 SLCO3A1Q9UIG8 710 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 CNTN6Q9UQ52 1028 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 PCDHB4Q9Y5E5 795 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 PTPRQQ9UMZ3 2332 aa16.14■□□□□ 0.17
COL2A1-207ENST00000490609 TTC34A8MYJ7 566 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 PPP1R3GB7ZBB8 358 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 M0QYV0 167 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 IRAK2O43187 625 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 PAPSS1O43252 624 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 PCDHGA12O60330 932 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 ATP5BP06576 529 aaKnown RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 POLR2EP19388 210 aaKnown RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 YWHAEP62258 255 aaKnown RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 PITX1P78337 314 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 IL9RQ01113 521 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 LRRC63Q05C16 580 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 COL28A1Q2UY09 1125 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 SOWAHCQ53LP3 525 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 DCAF6Q58WW2 860 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 MS4A13Q5J8X5 152 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 ZNF776Q68DI1 518 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 TTI2Q6NXR4 508 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 USP30Q70CQ3 517 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 UNC45BQ8IWX7 931 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 APCDD1Q8J025 514 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 ADAM32Q8TC27 787 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 MIS12Q9H081 205 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 CCDC86Q9H6F5 360 aaKnown RBP16.13■□□□□ 0.17
COL2A1-207ENST00000490609 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 SGK2Q9HBY8 427 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 RMND1Q9NWS8 449 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 DKK4Q9UBT3 224 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 SUN2Q9UH99 717 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 RAXQ9Y2V3 346 aa16.13■□□□□ 0.17
COL2A1-207ENST00000490609 A0A1W2PR77 199 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 GOLGA8CPA6NN73 597 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 MID1O15344 667 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 IGLV3-25P01717 112 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 DNTTP04053 509 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 SLC11A2P49281 568 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 SMAD1Q15797 465 aaKnown RBP16.12■□□□□ 0.17
COL2A1-207ENST00000490609 PITRM1Q5JRX3 1037 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 NUGGCQ68CJ6 796 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 KIAA0895LQ68EN5 471 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 DENND1BQ6P3S1 775 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 TAC4Q86UU9 113 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 MFN1Q8IWA4 741 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 AADATQ8N5Z0 425 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 PTPRN2Q92932 1015 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 SLC6A18Q96N87 628 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 BBC3Q96PG8 261 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-207ENST00000490609 CDC6Q99741 560 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 TSG101Q99816 390 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 FBXL12Q9NXK8 326 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 ADAMTS1Q9UHI8 967 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 MAN1B1Q9UKM7 699 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 ERVW-1Q9UQF0 538 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 TLR6Q9Y2C9 796 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 DOCK4Q8N1I0 1966 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 ITIH6Q6UXX5 1313 aa16.12■□□□□ 0.17
COL2A1-207ENST00000490609 A0A1B0GTQ1 180 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms