RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 NPC1O15118 1278 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 ZBTB24O43167 697 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 CALB1P05937 261 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 MYBL1P10243 752 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 HOXB2P14652 356 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 HNRNPLP14866 589 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 GBP1P32455 592 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 RING1Q06587 406 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF252P-AS1Q0IIN9 211 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 MAMLD1Q13495 774 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 BYSLQ13895 437 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 TAF5Q15542 800 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 RSPO4Q2I0M5 234 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 MPPE1Q53F39 396 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 EGFLAMQ63HQ2 1017 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 NUGGCQ68CJ6 796 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 PRR23CQ6ZRP0 262 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 BEND5Q7L4P6 421 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 CHPFQ8IZ52 775 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 JOSD2Q8TAC2 188 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 DDI1Q8WTU0 396 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 RFFLQ8WZ73 363 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 C18orf8Q96DM3 657 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 SPACA7Q96KW9 195 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 ADAM33Q9BZ11 813 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 MIS12Q9H081 205 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 DUSP15Q9H1R2 295 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 TRMT1Q9NXH9 659 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 DLL3Q9NYJ7 618 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 BCCIPQ9P287 314 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 TMEM59LQ9UK28 342 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 ATG2BQ96BY7 2078 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 PRRT4C9JH25 899 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 DCLK1O15075 740 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 FANCGO15287 622 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 MSI1O43347 362 aaKnown RBP10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 IGLV3-27P01718 113 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 FYNP06241 537 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 NCAM1P13591 858 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 TNNT1P13805 278 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 SCNN1AP37088 669 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC11A2P49281 568 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 RPL7AP62424 266 aaKnown RBP10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 OGDHQ02218 1023 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 NNTQ13423 1086 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 EIF4HQ15056 248 aaKnown RBP10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 ADGRF1Q5T601 910 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 PMS2CLQ68D20 193 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC26A9Q7LBE3 791 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 ANKS1BQ7Z6G8 1248 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 KIAA1328Q86T90 577 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 CPNE8Q86YQ8 564 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 PGBD3Q8N328 593 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC35G2Q8TBE7 412 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 IPO4Q8TEX9 1081 aaKnown RBP10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 UCMAQ8WVF2 138 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 CTNNBL1Q8WYA6 563 aaPredicted RBP10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 AZIN2Q96A70 460 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 FAM149B1Q96BN6 582 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 TRIM11Q96F44 468 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 SERPINB11Q96P15 392 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 NOX5Q96PH1 765 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 GABRG3Q99928 467 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 ARRDC1-AS1Q9H2J1 176 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 ZDHHC4Q9NPG8 344 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 MYO1AQ9UBC5 1043 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 MYOFQ9NZM1 2061 aa10.94□□□□□ -0.66
SCAMP4-208ENST00000489554 A0A1W2PQF6 199 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TMEM191CA6NGB0 347 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 SIGLEC16A6NMB1 481 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 CAPN9O14815 690 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 IRAK2O43187 625 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TIMM44O43615 452 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 IPO7O95373 1038 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF806P0C7X5 589 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 FLT3P36888 993 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 MPLP40238 635 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 P2RY2P41231 377 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 WASP42768 502 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TBX4P57082 545 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 SNX16P57768 344 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC6A3Q01959 620 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 OTUD1Q5VV17 481 aaPredicted RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 OR6B2Q6IFH4 312 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 DGLUCYQ7Z3D6 616 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TXLNBQ8N3L3 684 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF557Q8N988 423 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms