RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TBX4P57082 545 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 PITX1P78337 314 aaPredicted RBP12.21□□□□□ -0.45
ACTN4-206ENST00000489451 SCAPQ12770 1279 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 MPP7Q5T2T1 576 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.45
ACTN4-206ENST00000489451 MARCH9Q86YJ5 346 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 PPM1KQ8N3J5 372 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 HSFY1Q96LI6 401 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 NT5C1BQ96P26 610 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 GTPBP4Q9BZE4 634 aaKnown RBP12.21□□□□□ -0.45
ACTN4-206ENST00000489451 MIS12Q9H081 205 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 PCED1AQ9H1Q7 454 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 EBF2Q9HAK2 575 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 CYTH4Q9UIA0 394 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 CNTN6Q9UQ52 1028 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 NAALADL1Q9UQQ1 740 aa12.21□□□□□ -0.45
ACTN4-206ENST00000489451 KCNK3O14649 394 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 SEMA4FO95754 770 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 CER1O95813 267 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 CSKP41240 450 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 CTSOP43234 321 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-206ENST00000489451 GPD2P43304 727 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 ARID5AQ03989 594 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 EIF4EBP2Q13542 120 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-206ENST00000489451 SYPL2Q5VXT5 272 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 DENND1BQ6P3S1 775 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 TAC4Q86UU9 113 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 TRIM59Q8IWR1 403 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 SNX19Q92543 992 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 DHTKD1Q96HY7 919 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-206ENST00000489451 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 TIGD1Q96MW7 591 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 RSPH9Q9H1X1 276 aaPredicted RBP12.2□□□□□ -0.46
ACTN4-206ENST00000489451 METTL14Q9HCE5 456 aaKnown RBP12.2□□□□□ -0.46
ACTN4-206ENST00000489451 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 ACP6Q9NPH0 428 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 STIM2Q9P246 746 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 TJP2Q9UDY2 1190 aa12.2□□□□□ -0.46
ACTN4-206ENST00000489451 SHROOM3Q8TF72 1996 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PSMA7O14818 248 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 WNT9AO14904 365 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 IRAK2O43187 625 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PAPSS1O43252 624 aaPredicted RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 SIN3BO75182 1162 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 IGLV3-25P01717 112 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 ATXN1LP0C7T5 689 aaKnown RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 GCNT1Q02742 428 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 E2F5Q15329 346 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 HNRNPA1L2Q32P51 320 aaKnown RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 DCAF6Q58WW2 860 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 MS4A13Q5J8X5 152 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 C9orf64Q5T6V5 341 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 KLHL10Q6JEL2 608 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 IL27RAQ6UWB1 636 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 MFN1Q8IWA4 741 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 SCUBE3Q8IX30 993 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 HJURPQ8NCD3 748 aaPredicted RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PABPC3Q9H361 631 aaKnown RBP12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 ANKRD6Q9Y2G4 727 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PCDHB9Q9Y5E1 797 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 PCDHGB2Q9Y5G2 931 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
ACTN4-206ENST00000489451 DOCK9Q9BZ29 2069 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ITIH6Q6UXX5 1313 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 H0Y8X5 98 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 MID1O15344 667 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 P4HA2O15460 535 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ABCB7O75027 752 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 FSBPO95073 299 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 WNT1P04628 370 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ATP5BP06576 529 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 CD27P26842 260 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 CTSKP43235 329 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 GRIA4P48058 902 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 SLC11A2P49281 568 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 NUMBP49757 651 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 METAP1P53582 386 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 MARSP56192 900 aaKnown RBP12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ZBTB16Q05516 673 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 KCNH2Q12809 1159 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 NNTQ13423 1086 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 MORC3Q14149 939 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 KCNJ12Q14500 433 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 ARID5BQ14865 1188 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 SHBQ15464 509 aa12.18□□□□□ -0.46
ACTN4-206ENST00000489451 STILQ15468 1287 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms