RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 DRAP1Q14919 205 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 PITRM1Q5JRX3 1037 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 KLHDC7AQ5VTJ3 777 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 DCAF12L1Q5VU92 463 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 MINDY1Q8N5J2 469 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 ATP6V0D2Q8N8Y2 350 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 DNASE2BQ8WZ79 361 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 NOX5Q96PH1 765 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 KIAA1522Q9P206 1035 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
CCHCR1-215ENST00000488920 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 NUP205Q92621 2012 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 F5H5T6 163 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 OPHN1O60890 802 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 HSF2BPO75031 334 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SYPP08247 313 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC2A3P11169 496 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ABCB4P21439 1286 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 CCR1P32246 355 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ACSL1P33121 698 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SNX16P57768 344 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 BPIFB4P59827 614 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SEMA3BQ13214 749 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 NME3Q13232 169 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 PTPN20Q4JDL3 420 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 TCP11X2Q5H9J9 407 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 CIR1Q86X95 450 aaPredicted RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 APCDD1Q8J025 514 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ZCCHC9Q8N567 271 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 MYO19Q96H55 970 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 MRGPRX3Q96LB0 322 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 PRMT1Q99873 361 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 C6orf106Q9H6K1 298 aaPredicted RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 TAB2Q9NYJ8 693 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SUSD2Q9UGT4 822 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 EIF2B4Q9UI10 523 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 SLCO3A1Q9UIG8 710 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 ERVW-1Q9UQF0 538 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 CEP83Q9Y592 693 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
CCHCR1-215ENST00000488920 A0A1B0GTW7 788 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 TTC34A8MYJ7 566 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 BCAT2O15382 392 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 SIN3BO75182 1162 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 MOCS3O95396 460 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 DNTTP04053 509 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 ASLP04424 464 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 CYP11B1P15538 503 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 ECT2LQ008S8 904 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 ZBTB16Q05516 673 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 FOXC1Q12948 553 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 CT47A1Q5JQC4 288 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 C9orf64Q5T6V5 341 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 TAF3Q5VWG9 929 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 FBXL22Q6P050 247 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 PIP4P1Q86T03 277 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 GANCQ8TET4 914 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 SNX19Q92543 992 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 RSPH9Q9H1X1 276 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC32A1Q9H598 525 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 FBRSQ9HAH7 460 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
CCHCR1-215ENST00000488920 SPAARA0A1B0GVQ0 90 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 M0QYT0 321 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 SEMA4FO95754 770 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 C7P10643 843 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 CD59P13987 128 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 UCHL3P15374 230 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 TFE3P19532 575 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 EEF1GP26641 437 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 MZF1P28698 734 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 NOS2P35228 1153 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 GGCXP38435 758 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 SHC2P98077 582 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 CENPCQ03188 943 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 GRIK2Q13002 908 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 AUHQ13825 339 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 HNRNPA1L2Q32P51 320 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 RNF219Q5W0B1 726 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC26A9Q7LBE3 791 aa12.32□□□□□ -0.44
CCHCR1-215ENST00000488920 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms