RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 LRCH4O75427 683 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 PROSCO94903 275 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 EGFP01133 1207 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 TNFRSF4P43489 277 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 RPS9P46781 194 aaKnown RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 VAV2P52735 878 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 SCAPQ12770 1279 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 FSTL4Q6MZW2 842 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 IGSF8Q969P0 613 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 CALR3Q96L12 384 aaKnown RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 PPP1R9BQ96SB3 815 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 DESI2Q9BSY9 194 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 DHX35Q9H5Z1 703 aaKnown RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 FBRSL1Q9HCM7 1045 aaKnown RBP16.23■□□□□ 0.19
C9orf3-219ENST00000488186 AP4E1Q9UPM8 1137 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
C9orf3-219ENST00000488186 A0A0A6YYK5 440 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 A0A1B0GVM2 712 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 TCAF2A6NFQ2 919 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 TRIM24O15164 1050 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 DAPK3O43293 454 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 CLDN11O75508 207 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 MTA2O94776 668 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 LUC7L3O95232 432 aaKnown RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 MOCS3O95396 460 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 GJC1P36383 396 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 CDH4P55283 916 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 SEC13P55735 322 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 OXCT1P55809 520 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 IFI16Q16666 785 aaKnown RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 ODF2Q5BJF6 829 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 ANKS1BQ7Z6G8 1248 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 CIR1Q86X95 450 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 SYNPOQ8N3V7 929 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 ARFGAP1Q8N6T3 406 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 TERB1Q8NA31 727 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 FIBINQ8TAL6 211 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 UCMAQ8WVF2 138 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 HSPH1Q92598 858 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 TBC1D31Q96DN5 1066 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 MYEOVQ96EZ4 313 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 ZYG11BQ9C0D3 744 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 RBM12Q9NTZ6 932 aaKnown RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 GPATCH2LQ9NWQ4 482 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 DLGAP2Q9P1A6 1054 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 KIAA1522Q9P206 1035 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-219ENST00000488186 FBXO10Q9UK96 956 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 TFR2Q9UP52 801 aa16.22■□□□□ 0.19
C9orf3-219ENST00000488186 CACNA1IQ9P0X4 2223 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 DRGXA6NNA5 263 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 I6L893 689 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 PI15O43692 258 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 SPOPO43791 374 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CISD3P0C7P0 127 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CHRNB1P11230 501 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 L1CAMP32004 1257 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 MAN1A1P33908 653 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 SLC1A1P43005 524 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 NRG1Q02297 640 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 TCEAL1Q15170 157 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 E2F5Q15329 346 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 PPP6R3Q5H9R7 873 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 DAB2IPQ5VWQ8 1189 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CHST9Q7L1S5 443 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 PSTKQ8IV42 348 aaKnown RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 PYROXD2Q8N2H3 581 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 WFIKKN2Q8TEU8 576 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 SNRNP25Q9BV90 132 aaKnown RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CIPCQ9C0C6 399 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 ABCB8Q9NUT2 735 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 MPP6Q9NZW5 540 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 GGA2Q9UJY4 613 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 CLEC4EQ9ULY5 219 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 SLC27A6Q9Y2P4 619 aa16.21■□□□□ 0.19
C9orf3-219ENST00000488186 REXO2Q9Y3B8 237 aaKnown RBP16.21■□□□□ 0.19
C9orf3-219ENST00000488186 TIMM44O43615 452 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 BUB1O43683 1085 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 ATG13O75143 517 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 CNTN5O94779 1100 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 LRIG2O94898 1065 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 KRT7P08729 469 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
C9orf3-219ENST00000488186 POLR2EP19388 210 aaKnown RBP16.2■□□□□ 0.18
C9orf3-219ENST00000488186 EPHB2P29323 1055 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 OR1E1P30953 314 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 TPI1P60174 286 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 FZD5Q13467 585 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 CCINQ13939 588 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 KRT81Q14533 505 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 SMTNL2Q2TAL5 461 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 C5orf22Q49AR2 442 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 C2orf27AQ580R0 203 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 KCNT1Q5JUK3 1230 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms