RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZNF776Q68DI1 518 aaPredicted RBP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 TTC17Q96AE7 1141 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 ZDHHC5Q9C0B5 715 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 SYNCQ9H7C4 482 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 DNAAF2Q9NVR5 837 aaKnown RBP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 DDIT4Q9NX09 232 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 COX16Q9P0S2 106 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 EIF2B4Q9UI10 523 aaKnown RBP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 PCDHGC3Q9UN70 934 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 EPG5Q9HCE0 2579 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 UPK3BL1B0FP48 263 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 UPK3BL2E5RIL1 263 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 BCAT2O15382 392 aaPredicted RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 HSF2BPO75031 334 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 IGLV3-25P01717 112 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 GLI1P08151 1106 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 SLC2A3P11169 496 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 PITX1P78337 314 aaPredicted RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 HSP90AA4PQ58FG1 418 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 PITRM1Q5JRX3 1037 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 RNF219Q5W0B1 726 aaPredicted RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 OR6B2Q6IFH4 312 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 MMS22LQ6ZRQ5 1243 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 PIP4P1Q86T03 277 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 DEFB106AQ8N104 65 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 C1orf131Q8NDD1 294 aaKnown RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 LMLNQ96KR4 655 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 BTBD1Q9H0C5 482 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 NDST4Q9H3R1 872 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 SIX2Q9NPC8 291 aa24.41■■□□□ 1.5
PLOD3-215ENST00000487563 KIAA1522Q9P206 1035 aaPredicted RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 AJAP1Q9UKB5 411 aaPredicted RBP24.41■■□□□ 1.5
PLOD3-215ENST00000487563 ABCB4P21439 1286 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 SIM1P81133 766 aaPredicted RBP24.4■■□□□ 1.5
PLOD3-215ENST00000487563 VWA3BQ502W6 1294 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 FSCBQ5H9T9 825 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 SMYD5Q6GMV2 418 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 C11orf57Q6ZUT1 292 aaPredicted RBP24.4■■□□□ 1.5
PLOD3-215ENST00000487563 WDTC1Q8N5D0 677 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 GANCQ8TET4 914 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 TUBGCP2Q9BSJ2 902 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 PDCL3Q9H2J4 239 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 MTG2Q9H4K7 406 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 ASNSD1Q9NWL6 643 aa24.4■■□□□ 1.5
PLOD3-215ENST00000487563 INTS6Q9UL03 887 aaKnown RBP24.4■■□□□ 1.5
PLOD3-215ENST00000487563 SPAARA0A1B0GVQ0 90 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 KCNU1A8MYU2 1149 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 RNASEH1O60930 286 aaKnown RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 GRAP2O75791 330 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 SEMA4FO95754 770 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 PNMA6AP0CW24 399 aaPredicted RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 ERCC5P28715 1186 aaPredicted RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 CCR1P32246 355 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 ACSL1P33121 698 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 RAPGEF1Q13905 1077 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 HNRNPA1L2Q32P51 320 aaKnown RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 RABGAP1LQ5R372 815 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 FAM183BPQ6ZVS7 135 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 SLC47A2Q86VL8 602 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 DHX40Q8IX18 779 aaKnown RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 SLC2A13Q96QE2 648 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 C6orf106Q9H6K1 298 aaPredicted RBP24.39■■□□□ 1.49
PLOD3-215ENST00000487563 ERVW-1Q9UQF0 538 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 NCKAP1Q9Y2A7 1128 aa24.39■■□□□ 1.49
PLOD3-215ENST00000487563 MAP1BP46821 2468 aaKnown RBP24.38■■□□□ 1.49
PLOD3-215ENST00000487563 CACNA1BQ00975 2339 aa24.38■■□□□ 1.49
PLOD3-215ENST00000487563 FOXN3O00409 490 aaPredicted RBP24.38■■□□□ 1.49
PLOD3-215ENST00000487563 SIN3BO75182 1162 aa24.38■■□□□ 1.49
PLOD3-215ENST00000487563 SRPRAP08240 638 aaKnown RBP24.38■■□□□ 1.49
PLOD3-215ENST00000487563 BPIFB4P59827 614 aa24.38■■□□□ 1.49
PLOD3-215ENST00000487563 SLC14A1Q13336 389 aa24.38■■□□□ 1.49
PLOD3-215ENST00000487563 TTC39BQ5VTQ0 682 aaPredicted RBP24.38■■□□□ 1.49
PLOD3-215ENST00000487563 MYO19Q96H55 970 aa24.38■■□□□ 1.49
PLOD3-215ENST00000487563 RSPH9Q9H1X1 276 aaPredicted RBP24.38■■□□□ 1.49
PLOD3-215ENST00000487563 CACNA1EQ15878 2313 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 ERBB2P04626 1255 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 CD59P13987 128 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 SPINK2P20155 84 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 CTSOP43234 321 aaPredicted RBP24.37■■□□□ 1.49
PLOD3-215ENST00000487563 ECT2LQ008S8 904 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 SFSWAPQ12872 951 aaKnown RBP24.37■■□□□ 1.49
PLOD3-215ENST00000487563 NME3Q13232 169 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 HNRNPDQ14103 355 aaKnown RBP24.37■■□□□ 1.49
PLOD3-215ENST00000487563 KDM1BQ8NB78 822 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 MRGPRX3Q96LB0 322 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 SGK2Q9HBY8 427 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 PLCB1Q9NQ66 1216 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 SCML1Q9UN30 329 aa24.37■■□□□ 1.49
PLOD3-215ENST00000487563 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.37■■□□□ 1.49
PLOD3-215ENST00000487563 DAB1O75553 588 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 FSBPO95073 299 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 CER1O95813 267 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 RDXP35241 583 aaKnown RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 CLCN1P35523 988 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 ANP32AP39687 249 aaKnown RBP24.36■■□□□ 1.49
PLOD3-215ENST00000487563 KCNJ12Q14500 433 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 PTPN20Q4JDL3 420 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 MIIPQ5JXC2 388 aa24.36■■□□□ 1.49
PLOD3-215ENST00000487563 IL27RAQ6UWB1 636 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms