RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 HCAR3P49019 387 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 NUMBP49757 651 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 LIMK2P53671 638 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 CDC16Q13042 620 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 CFAP157Q5JU67 520 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 SYCP2LQ5T4T6 812 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 PDPK2PQ6A1A2 396 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 ZFP1Q6P2D0 407 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 GADL1Q6ZQY3 521 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 DENND5BQ6ZUT9 1274 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 ERO1BQ86YB8 467 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 FBXW8Q8N3Y1 598 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 NLRP7Q8WX94 980 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 CLMNQ96JQ2 1002 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 SORT1Q99523 831 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 EBF4Q9BQW3 602 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 MRPL45Q9BRJ2 306 aaKnown RBP12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 TRHDEQ9UKU6 1024 aa12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 UBQLN1Q9UMX0 589 aaKnown RBP12.71□□□□□ -0.37
TMEM39B-208ENST00000487305 RBM47A0AV96 593 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 XPO1O14980 1071 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 BUD23O43709 281 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 AXLP30530 894 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 NOS2P35228 1153 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 NPY2RP49146 381 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 RPL10AP62906 217 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 ARHGAP1Q07960 439 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 UBAP2LQ14157 1087 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 RAB6CQ53S08 254 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 EPGNQ6UW88 154 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 C16orf89Q6UX73 402 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 TMEM135Q86UB9 458 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 OR6B3Q8NGW1 331 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 NT5C3BQ969T7 300 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 P2RY11Q96G91 374 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 SNX27Q96L92 541 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 TTC1Q99614 292 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 RBBP8Q99708 897 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 TRIM4Q9C037 500 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 RAB6CQ9H0N0 254 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 EPB41L1Q9H4G0 881 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 DMAP1Q9NPF5 467 aaPredicted RBP12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 VTI1BQ9UEU0 232 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 CDH22Q9UJ99 828 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 KAT6AQ92794 2004 aa12.71□□□□□ -0.38
TMEM39B-208ENST00000487305 SMIM31A0A1B0GVY4 71 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 ENO4A6NNW6 628 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF195O14628 629 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 UQCRBP14927 111 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 MTTPP55157 894 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 PRKG1Q13976 671 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 ITPRIPL1Q6GPH6 555 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 BNIPLQ7Z465 357 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 C10orf107Q8IVU9 208 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 KBTBD2Q8IY47 623 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 GPC2Q8N158 579 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 FBXO27Q8NI29 283 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 NCSTNQ92542 709 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 CPB2Q96IY4 423 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 PPP1R2P1Q96PQ5 205 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 CDH19Q9H159 772 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 RRN3Q9NYV6 651 aa12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.7□□□□□ -0.38
TMEM39B-208ENST00000487305 RRN3P2A6NIE6 340 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 TRIM13O60858 407 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 COL6A2P12110 1019 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 KCNA4P22459 653 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 MGAT1P26572 445 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 GNL1P36915 607 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 TUBP50607 506 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF33AQ06730 810 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 GRM2Q14416 872 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 HERC3Q15034 1050 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 PRAMEF18Q5VWM3 479 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ARMCX2Q7L311 632 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 FBXO16Q8IX29 292 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 NTAN1Q96AB6 310 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ZNF778Q96MU6 729 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 ILKAPQ9H0C8 392 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 SNX25Q9H3E2 840 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 KCNH4Q9UQ05 1017 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 RPS6KL1Q9Y6S9 549 aa12.69□□□□□ -0.38
TMEM39B-208ENST00000487305 COMMD3-BMI1R4GMX3 469 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms