RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 RHBDL3P58872 404 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 PFKPQ01813 784 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 BFSP2Q13515 415 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SLC9B1Q4ZJI4 515 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SCARA3Q6AZY7 606 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 LILRA2Q8N149 483 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ADAM32Q8TC27 787 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 DHRS1Q96LJ7 313 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CAMKK2Q96RR4 588 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MTG1Q9BT17 334 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ILKAPQ9H0C8 392 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 ING2Q9H160 280 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SNX25Q9H3E2 840 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 WDR55Q9H6Y2 383 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 RSAD1Q9HA92 442 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 MKS1Q9NXB0 559 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 WRAP73Q9P2S5 460 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-209ENST00000487188 CCPG1Q9ULG6 757 aa6.39□□□□□ -1.39
VPS13D-209ENST00000487188 SCN7AQ01118 1682 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 HEATR9A2RTY3 570 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ZBTB14O43829 449 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 DEAF1O75398 565 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CYP2C9P11712 490 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 YWHABP31946 246 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SESN2P58004 480 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 GTF2BQ00403 316 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CDO1Q16878 200 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 PLA2G4FQ68DD2 849 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TRMT10BQ6PF06 316 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 LAYNQ6UX15 382 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 DEFB132Q7Z7B7 95 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 MCF2L2Q86YR7 1114 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 HERC6Q8IVU3 1022 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 GRIN3AQ8TCU5 1115 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CALML6Q8TD86 181 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF606Q8WXB4 792 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TSPAN18Q96SJ8 248 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 P2RX7Q99572 595 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 NPAS2Q99743 824 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CDCA7Q9BWT1 371 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 INO80BQ9C086 356 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 NOL11Q9H8H0 719 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 XPNPEP3Q9NQH7 507 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 GPRC5DQ9NZD1 345 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 RNF11Q9Y3C5 154 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM150BA6NC51 233 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 RIMBP2O15034 1052 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 PRPSAP2O60256 369 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 GPC4O75487 556 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ATE1O95260 518 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CYP3A4P08684 503 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 L1CAMP32004 1257 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SHMT1P34896 483 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 PTPN7P35236 360 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 GSSP48637 474 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 RARRES1P49788 294 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TXNL4AP83876 142 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CEACAM7Q14002 265 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 MAPK11Q15759 364 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CES4AQ5XG92 561 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SLC9A4Q6AI14 798 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TATDN1Q6P1N9 297 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 FAM196AQ6ZSG2 479 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 EMC1Q8N766 993 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF781Q8N8C0 355 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CHPT1Q8WUD6 406 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TRIM15Q9C019 465 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 MYH9P35579 1960 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ITGB4P16144 1822 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 MAST2Q6P0Q8 1798 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ZBBXA8MT70 800 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 H3BMQ9 156 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TIPRLO75663 272 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 BCAS2O75934 225 aaPredicted RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SRP72O76094 671 aaKnown RBP6.38□□□□□ -1.39
VPS13D-209ENST00000487188 NDUFB10O96000 172 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SERPINB2P05120 415 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 CKMT2P17540 419 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 MMP8P22894 467 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ACOT2P49753 483 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TPTEP56180 551 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 PSME3P61289 254 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ADAM17P78536 824 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TUBB3Q13509 450 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TMEM132AQ24JP5 1023 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 USP41Q3LFD5 358 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 FAM47CQ5HY64 1035 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 FGD3Q5JSP0 725 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 DEPDC1Q5TB30 811 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 AFAP1L2Q8N4X5 818 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 SLC15A4Q8N697 577 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 TBC1D15Q8TC07 691 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ACMSDQ8TDX5 336 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 KBTBD7Q8WVZ9 684 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 ZNF778Q96MU6 729 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 COG8Q96MW5 612 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 OR52B2Q96RD2 323 aa6.38□□□□□ -1.39
VPS13D-209ENST00000487188 NEURL2Q9BR09 285 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms