RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TLR8Q9NR97 1041 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SMC4Q9NTJ3 1288 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 MTMR4Q9NYA4 1195 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 SEMA5BQ9P283 1151 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ARHGAP26Q9UNA1 814 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 ENTPD2Q9Y5L3 495 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 TOP2BQ02880 1626 aa5.51□□□□□ -1.53
PRPF38A-203ENST00000487160 KAT6AQ92794 2004 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 MAP3K4Q9Y6R4 1608 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 CCDC196A0A1B0GTZ2 297 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 TMEM191CA6NGB0 347 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 TTC34A8MYJ7 566 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 B8ZZF3 427 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 H3BNC9 293 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 PEX12O00623 359 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 ANP32CO43423 234 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 LYL1P12980 280 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 NDUFS1P28331 727 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 KRT9P35527 623 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC37A1P57057 533 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 SHC2P98077 582 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 HOXA4Q00056 320 aaPredicted RBP5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 CDK18Q07002 472 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 THOC5Q13769 683 aaKnown RBP5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 ERCC6LQ2NKX8 1250 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 CEP85Q6P2H3 762 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 TMEM65Q6PI78 240 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 CRIP3Q6Q6R5 217 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 TRIM72Q6ZMU5 477 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 DCDC5Q6ZRR9 648 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 TCP11L2Q8N4U5 519 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 GPR78Q96P69 363 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 RNF26Q9BY78 433 aaPredicted RBP5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 PAIP1Q9H074 479 aaKnown RBP5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 JMJD4Q9H9V9 463 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 IL21RQ9HBE5 538 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 HSF4Q9ULV5 492 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 MYRFQ9Y2G1 1151 aa5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 HEMK1Q9Y5R4 338 aaPredicted RBP5.5□□□□□ -1.53
PRPF38A-203ENST00000487160 SPATA31A1Q5TZJ5 1347 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 TCRBV5S1A1TA0A578 114 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 C16orf96A6NNT2 1141 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 DHX16O60231 1041 aaKnown RBP5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 IFIT1P09914 478 aaKnown RBP5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 CYP2D6P10635 497 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 HOXD12P35452 270 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 PGM1P36871 562 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 VPS41P49754 854 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 PUM1Q14671 1186 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 KCNB1Q14721 858 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 AWAT1Q58HT5 328 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 TMEM63BQ5T3F8 832 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 DENND1BQ6P3S1 775 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 TMEM88Q6PEY1 159 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 TSPYL6Q8N831 410 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 KCNJ9Q92806 393 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 ZUFSPQ96AP4 578 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 REPS1Q96D71 796 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 MASTLQ96GX5 879 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 HTATIP2Q9BUP3 242 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 AGXT2Q9BYV1 514 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 ACAD9Q9H845 621 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 CPNE5Q9HCH3 593 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 PREBQ9HCU5 417 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 THAP1Q9NVV9 213 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 ASNSD1Q9NWL6 643 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 SH3BP4Q9P0V3 963 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 PACSIN3Q9UKS6 424 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 TBX20Q9UMR3 447 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 GDAQ9Y2T3 454 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 GLI2P10070 1586 aa5.49□□□□□ -1.53
PRPF38A-203ENST00000487160 WRNQ14191 1432 aaPredicted RBP eCLIP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 KIF21BO75037 1637 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 NPIPB13A6NJU9 1138 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 HMGB1P1B2RPK0 211 aaPredicted RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 NPIPB4C9JG80 1138 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 FOXN1O15353 648 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 GCATO75600 419 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 JTBO76095 146 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 GCP02774 474 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ALDOCP09972 364 aaKnown RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 TNNT1P13805 278 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 PRPH2P23942 346 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 AVPR2P30518 371 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ZNF84P51523 738 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC14A1Q13336 389 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 LARS2Q15031 903 aaKnown RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 GPR162Q16538 588 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 AKNAD1Q5T1N1 836 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 LIPMQ5VYY2 423 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 FAAH2Q6GMR7 532 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 FAM180BQ6P0A1 224 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms