RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ASTE1Q2TB18 679 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 FBXL22Q6P050 247 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 PSTKQ8IV42 348 aaKnown RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CHPFQ8IZ52 775 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CARNMT1Q8N4J0 409 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CIPCQ9C0C6 399 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 SIK2Q9H0K1 926 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 THAP2Q9H0W7 228 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 OSBPL2Q9H1P3 480 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 ABCB8Q9NUT2 735 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 STIM2Q9P246 746 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 MYO1AQ9UBC5 1043 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 PPARGC1AQ9UBK2 798 aaKnown RBP15.11■□□□□ 0.01
LIMS3-205ENST00000487150 IP6K2Q9UHH9 426 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 INTUQ9ULD6 942 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 PCDHGA2Q9Y5H1 932 aa15.11■□□□□ 0.01
LIMS3-205ENST00000487150 E9PAM4 449 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 MYO1FO00160 1098 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 GJB6O95452 261 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 APBB3O95704 486 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 HNRNPLP14866 589 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIMS3-205ENST00000487150 HLA-FP30511 346 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 NTSR1P30989 418 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 PCK1P35558 622 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ETFBP38117 255 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 GALCP54803 685 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 GSDMDP57764 484 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 SULT2A1Q06520 285 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 STARD3Q14849 445 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 C5orf22Q49AR2 442 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 C2orf27AQ580R0 203 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 C6orf118Q5T5N4 469 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 SETD3Q86TU7 594 aaPredicted RBP15.1■□□□□ 0.01
LIMS3-205ENST00000487150 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 CCAR2Q8N163 923 aaKnown RBP15.1■□□□□ 0.01
LIMS3-205ENST00000487150 TXLNBQ8N3L3 684 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 NIPA2Q8N8Q9 360 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 EZH1Q92800 747 aaPredicted RBP15.1■□□□□ 0.01
LIMS3-205ENST00000487150 EPAS1Q99814 870 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 NUP85Q9BW27 656 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ADAM33Q9BZ11 813 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ZYG11BQ9C0D3 744 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 POLMQ9NP87 494 aaPredicted RBP15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ELOVL2Q9NXB9 296 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ANAPC7Q9UJX3 599 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 NENFQ9UMX5 172 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 PLA2G4CQ9UP65 541 aa15.1■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF318Q5VUA4 2279 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 IGLV3-10A0A075B6K4 115 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 KLF8O95600 359 aaPredicted RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 TIE1P35590 1138 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 SGSHP51688 502 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 ST8SIA6P61647 398 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 SATB1Q01826 763 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 CSTF1Q05048 431 aaKnown RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 GAS6Q14393 721 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 GEN1Q17RS7 908 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 RNF219Q5W0B1 726 aaPredicted RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 SCYL2Q6P3W7 929 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF783Q6ZMS7 281 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 KIAA0907Q7Z7F0 614 aaPredicted RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 CFAP52Q8N1V2 620 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 KDM1BQ8NB78 822 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 PRSS33Q8NF86 280 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 TSTD1Q8NFU3 115 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 ZNF564Q8TBZ8 553 aaPredicted RBP15.09■□□□□ 0.01
LIMS3-205ENST00000487150 TBC1D31Q96DN5 1066 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 FBRSQ9HAH7 460 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 OR12D3Q9UGF7 316 aa15.09■□□□□ 0.01
LIMS3-205ENST00000487150 MIA3Q5JRA6 1907 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 DRGXA6NNA5 263 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 PRRT4C9JH25 899 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 SP9P0CG40 484 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 HOXB2P14652 356 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 FECHP22830 423 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 L1CAMP32004 1257 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 CNR2P34972 360 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 NNMTP40261 264 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 MAPKAPK2P49137 400 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 ATXN1P54253 815 aaKnown RBP15.08■□□□□ 0
LIMS3-205ENST00000487150 MESP2Q0VG99 397 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 TCF15Q12870 199 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 CRY1Q16526 586 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 ALLCQ8N6M5 410 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 TXNDC5Q8NBS9 432 aaKnown RBP15.08■□□□□ 0
LIMS3-205ENST00000487150 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
LIMS3-205ENST00000487150 RFFLQ8WZ73 363 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms