RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 BNC1Q01954 994 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 CDH18Q13634 790 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 CCDC117Q8IWD4 279 aaPredicted RBP25.42■■□□□ 1.66
LIME1-206ENST00000487026 ZNF557Q8N988 423 aaPredicted RBP25.42■■□□□ 1.66
LIME1-206ENST00000487026 SHC3Q92529 594 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 MRGPRX3Q96LB0 322 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 CPXM1Q96SM3 734 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 TRIM62Q9BVG3 475 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 IL21RQ9HBE5 538 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 SYNJ2BP-COX16A0A087WUM0 186 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 H0Y626 953 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 HYAL3O43820 417 aaPredicted RBP25.41■■□□□ 1.66
LIME1-206ENST00000487026 GRAP2O75791 330 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 ST8SIA6P61647 398 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 TPD52L1Q16890 204 aaPredicted RBP25.41■■□□□ 1.66
LIME1-206ENST00000487026 CHSY1Q86X52 802 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 DHX40Q8IX18 779 aaKnown RBP25.41■■□□□ 1.66
LIME1-206ENST00000487026 MLKLQ8NB16 471 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 C1orf216Q8TAB5 229 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 PPP1R13BQ96KQ4 1090 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 FAM81BQ96LP2 452 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 SIX2Q9NPC8 291 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 COX16Q9P0S2 106 aa25.41■■□□□ 1.66
LIME1-206ENST00000487026 SIN3BO75182 1162 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 LUC7L3O95232 432 aaKnown RBP25.4■■□□□ 1.66
LIME1-206ENST00000487026 IGLV3-25P01717 112 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 CSNK1EP49674 416 aaKnown RBP25.4■■□□□ 1.66
LIME1-206ENST00000487026 SLC14A1Q13336 389 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 PITRM1Q5JRX3 1037 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 ZNF776Q68DI1 518 aaPredicted RBP25.4■■□□□ 1.66
LIME1-206ENST00000487026 UNQ6494/PRO21346Q6UXR6 183 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 APCDD1Q8J025 514 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 DEFB106AQ8N104 65 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 BTN2A3PQ96KV6 586 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 ZDHHC5Q9C0B5 715 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 BTBD1Q9H0C5 482 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 FAM204AQ9H8W3 233 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 FBRSQ9HAH7 460 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 CHMP5Q9NZZ3 219 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 DNAJC12Q9UKB3 198 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 ERVW-1Q9UQF0 538 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 AKAP13Q12802 2813 aa25.4■■□□□ 1.66
LIME1-206ENST00000487026 GTPBP10A4D1E9 387 aaKnown RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 TTC34A8MYJ7 566 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 FOXN3O00409 490 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 SEMA4FO95754 770 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 ASLP04424 464 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 PROS1P07225 676 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 PNMA6AP0CW24 399 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 C7P10643 843 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 ZBTB16Q05516 673 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 EIF4EBP2Q13542 120 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 HNRNPA1L2Q32P51 320 aaKnown RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 HSP90AA4PQ58FG1 418 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 CIR1Q86X95 450 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 GANCQ8TET4 914 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 ADAM33Q9BZ11 813 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 RSPH9Q9H1X1 276 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 GAREM1Q9H706 876 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.39■■□□□ 1.662e-10■■□□□ 12.5
LIME1-206ENST00000487026 KIAA1522Q9P206 1035 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 SLCO3A1Q9UIG8 710 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.39■■□□□ 1.66
LIME1-206ENST00000487026 CEP83Q9Y592 693 aa25.39■■□□□ 1.66
LIME1-206ENST00000487026 ASPMQ8IZT6 3477 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 A0A1B0GVT2 93 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 KCNU1A8MYU2 1149 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 FSBPO95073 299 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 CDK17Q00537 523 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 OR6B2Q6IFH4 312 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 FAM183BPQ6ZVS7 135 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 ATP6V0D2Q8N8Y2 350 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 C1orf131Q8NDD1 294 aaKnown RBP25.38■■□□□ 1.65
LIME1-206ENST00000487026 BIRC7Q96CA5 298 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 RPL10LQ96L21 214 aaKnown RBP25.38■■□□□ 1.65
LIME1-206ENST00000487026 SLC2A13Q96QE2 648 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 PCED1AQ9H1Q7 454 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 CLSTN2Q9H4D0 955 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 PLCB1Q9NQ66 1216 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 DDIT4Q9NX09 232 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 PCDHGC3Q9UN70 934 aa25.38■■□□□ 1.65
LIME1-206ENST00000487026 CLCN1P35523 988 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 PTK2Q05397 1052 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 TRIP6Q15654 476 aaKnown RBP25.37■■□□□ 1.65
LIME1-206ENST00000487026 HLA-BQ31612 363 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 TTC31Q49AM3 519 aaPredicted RBP25.37■■□□□ 1.65
LIME1-206ENST00000487026 C9orf64Q5T6V5 341 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 SLC47A2Q86VL8 602 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 NAXDQ8IW45 347 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 RNF34Q969K3 372 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 PRMT1Q99873 361 aaKnown RBP25.37■■□□□ 1.65
LIME1-206ENST00000487026 PABPC3Q9H361 631 aaKnown RBP25.37■■□□□ 1.65
LIME1-206ENST00000487026 SLC12A6Q9UHW9 1150 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 KLK13Q9UKR3 277 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 PCDHB9Q9Y5E1 797 aa25.37■■□□□ 1.65
LIME1-206ENST00000487026 F5H5T6 163 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 MOCS3O95396 460 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 ERBB2P04626 1255 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 KRT9P35527 623 aa25.36■■□□□ 1.65
LIME1-206ENST00000487026 ECT2LQ008S8 904 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms