RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	TOP3B	O95985	862 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	ADH1C	P00326	375 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RALA	P11233	206 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	NCAM1	P13591	858 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RARG	P13631	454 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	SPINK2	P20155	84 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RFC1	P35251	1148 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	FLT3	P36888	993 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	PSEN1	P49768	467 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	NAP1L1	P55209	391 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RPL7A	P62424	266 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	DCAF6	Q58WW2	860 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	PPP1R15B	Q5SWA1	713 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	EMC10	Q5UCC4	262 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	ANO7	Q6IWH7	933 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	NUDT18	Q6ZVK8	323 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	DEFB106A	Q8N104	65 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	FRMD1	Q8N878	549 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	USP33	Q8TEY7	942 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RNF139	Q8WU17	664 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	RXFP2	Q8WXD0	754 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	ACD	Q96AP0	544 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	TRIM62	Q9BVG3	475 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	TSGA10	Q9BZW7	698 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	TRIM7	Q9C029	511 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	OSGEP	Q9NPF4	335 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	LZTFL1	Q9NQ48	299 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	ABCC13	Q9NSE7	274 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	CLIC5	Q9NZA1	410 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	UVRAG	Q9P2Y5	699 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	ANAPC7	Q9UJX3	599 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	NUDT5	Q9UKK9	219 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	GUCA1B	Q9UMX6	200 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	NAALADL1	Q9UQQ1	740 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	PCDHGA5	Q9Y5G8	931 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991	DUSP10	Q9Y6W6	482 aa		13.57	□□□□□ -0.24
NR1H3-223	ENST00000486991		A0A0A6YYK5	440 aa	Predicted RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	MACROD2	A1Z1Q3	448 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	TMEM191C	A6NGB0	347 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	TMEM110-MUSTN1	A8MSY1	372 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	BUB1	O43683	1085 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	RHOBTB1	O94844	696 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	PDGFRA	P16234	1089 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	GPD1	P21695	349 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	EIF2D	P41214	584 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	ELF2	Q15723	593 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	TMEM92	Q6UXU6	159 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991		Q6ZNB5	142 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	RSRC2	Q7L4I2	434 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	ETFBKMT	Q8IXQ9	262 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	TSTD1	Q8NFU3	115 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	RLN3	Q8WXF3	142 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	BTBD6	Q96KE9	485 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	SLC2A13	Q96QE2	648 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	EBF1	Q9UH73	591 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	LSM7	Q9UK45	103 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZKSCAN5	Q9Y2L8	839 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	PAXBP1	Q9Y5B6	917 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	NUP205	Q92621	2012 aa		13.56	□□□□□ -0.24
NR1H3-223	ENST00000486991	THADA	Q6YHU6	1953 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	LNP1	A1A4G5	178 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	BTNL10	A8MVZ5	291 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	HOXC11	O43248	304 aa	Predicted RBP	13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	CCP110	O43303	1012 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	KLKB1	P03952	638 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	FYN	P06241	537 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	IRF1	P10914	325 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	PSMA2	P25787	234 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	SDC4	P31431	198 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	NOS2	P35228	1153 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	ATP5C1	P36542	298 aa	Known RBP	13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	ARHGAP25	P42331	645 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	MATK	P42679	507 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	SULT1E1	P49888	294 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	NOVA1	P51513	510 aa	Known RBP	13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	GAD2	Q05329	585 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	C10orf120	Q5SQS8	335 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	LY6G5C	Q5SRR4	150 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	SYPL2	Q5VXT5	272 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	TRNP1	Q6NT89	227 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	HTR3D	Q70Z44	454 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	REXO1L1P	Q8IX06	675 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	CCAR2	Q8N163	923 aa	Known RBP	13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	MDGA1	Q8NFP4	955 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	CFAP57	Q96MR6	1250 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	SALL4	Q9UJQ4	1053 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	STAP1	Q9ULZ2	295 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	ASPM	Q8IZT6	3477 aa		13.55	□□□□□ -0.24
NR1H3-223	ENST00000486991	CKAP5	Q14008	2032 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	SPEG	Q15772	3267 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	C2CD4B	A6NLJ0	364 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	USP27X	A6NNY8	438 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	C1QTNF9B	B2RNN3	333 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	MYO1F	O00160	1098 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	STC2	O76061	302 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms