RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CNTNAP4Q9C0A0 1308 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 MAP3K6O95382 1288 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
CCDC171-208ENST00000486641 GH2P01242 217 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 CDH3P22223 829 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 CNTFP26441 200 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 GRIA1P42261 906 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 DPYSQ14117 519 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 NIPAL1Q6NVV3 410 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 NAPRTQ6XQN6 538 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 XIRP1Q702N8 1843 aaKnown RBP10.91□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 PGAM4Q8N0Y7 254 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 ACMSDQ8TDX5 336 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 CHPT1Q8WUD6 406 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 ATP2A3Q93084 1043 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 LRRC39Q96DD0 335 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 RPF2Q9H7B2 306 aaKnown RBP10.91□□□□□ -0.66
CCDC171-208ENST00000486641 RSAD1Q9HA92 442 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 WDR41Q9HAD4 459 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 XPNPEP3Q9NQH7 507 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 TSC22D4Q9Y3Q8 395 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 PCDHB12Q9Y5F1 795 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF701M0R085 212 aaPredicted RBP10.9□□□□□ -0.66
CCDC171-208ENST00000486641 NEMP1O14524 444 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 GNPATO15228 680 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 HSPA4LO95757 839 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
CCDC171-208ENST00000486641 TCF7P36402 384 aaPredicted RBP10.9□□□□□ -0.66
CCDC171-208ENST00000486641 MAGEA3P43357 314 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 EIF2B2P49770 351 aaKnown RBP10.9□□□□□ -0.66
CCDC171-208ENST00000486641 PRKG1Q13976 671 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 PTPN20Q4JDL3 420 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 ZBTB41Q5SVQ8 909 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 SLC9A4Q6AI14 798 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 SLC2A7Q6PXP3 512 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 TNS4Q8IZW8 715 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 FAM47BQ8NA70 645 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 SLC7A3Q8WY07 619 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 SNX27Q96L92 541 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 ZNF518BQ9C0D4 1074 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 HAPLN2Q9GZV7 340 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 PRDM16Q9HAZ2 1276 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 MRPL11Q9Y3B7 192 aaKnown RBP10.9□□□□□ -0.66
CCDC171-208ENST00000486641 AP4S1Q9Y587 144 aa10.9□□□□□ -0.66
CCDC171-208ENST00000486641 A0A1W2PPW3 197 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 H3BMQ9 156 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 J3QRK9 145 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 GIPC1O14908 333 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 SPTLC1O15269 473 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 HTRA2O43464 458 aaPredicted RBP10.9□□□□□ -0.67
CCDC171-208ENST00000486641 SULT1C4O75897 302 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 OXSR1O95747 527 aaPredicted RBP10.9□□□□□ -0.67
CCDC171-208ENST00000486641 LIG4P49917 911 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 KCNC4Q03721 635 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 ITGA7Q13683 1181 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 TKFCQ3LXA3 575 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 FGD3Q5JSP0 725 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 EGFLAMQ63HQ2 1017 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 DENND1BQ6P3S1 775 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 TMEM110Q86TL2 294 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 TANKQ92844 425 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 FBXL8Q96CD0 374 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 MOCOSQ96EN8 888 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 SGF29Q96ES7 293 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 ZBTB45Q96K62 511 aaPredicted RBP10.9□□□□□ -0.67
CCDC171-208ENST00000486641 CNDP1Q96KN2 507 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 COG8Q96MW5 612 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 PEBP4Q96S96 227 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 CIB1Q99828 191 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 TRPC7Q9HCX4 862 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 CYP26B1Q9NR63 512 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 COL20A1Q9P218 1284 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 FAM198AQ9UFP1 575 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 CYTH4Q9UIA0 394 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 AGO2Q9UKV8 859 aaKnown RBP10.9□□□□□ -0.67
CCDC171-208ENST00000486641 USP18Q9UMW8 372 aa10.9□□□□□ -0.67
CCDC171-208ENST00000486641 ARID2Q68CP9 1835 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 A0A087WXM4 84 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PIK3R2O00459 728 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 BAIAP3O94812 1187 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 METTL18O95568 372 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MCF2P10911 925 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CCDC130P13994 396 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CDH5P33151 784 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 MAGEA6P43360 314 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 BMXP51813 675 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 CDH6P55285 790 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PSMC1P62191 440 aaKnown RBP10.89□□□□□ -0.67
CCDC171-208ENST00000486641 PRAMEP78395 509 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 BNIP3Q12983 259 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 ART3Q13508 389 aa10.89□□□□□ -0.67
CCDC171-208ENST00000486641 SMAD1Q15797 465 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms