RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 GDE1Q9NZC3 331 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 CFAP97Q9P2B7 532 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 AMACRQ9UHK6 382 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 VANGL2Q9ULK5 521 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 R3HDM2Q9Y2K5 976 aaKnown RBP13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 UTP11Q9Y3A2 253 aaKnown RBP13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 SNX10Q9Y5X0 201 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
VTI1BP1-201ENST00000486325 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 H7C0C1 242 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 LEFTY2O00292 366 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 SLC9A3R1O14745 358 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 PPP1R12AO14974 1030 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 GLP2RO95838 553 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 RBP3P10745 1247 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 IGFBP4P22692 258 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 MTHFRP42898 656 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ATP5OP48047 213 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ZNF33AQ06730 810 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 NADSYN1Q6IA69 706 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 Q6ZNB5 142 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 CDKL3Q8IVW4 592 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ZNF683Q8IZ20 524 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 LGI2Q8N0V4 545 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 CPXM2Q8N436 756 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ADAMTS19Q8TE59 1207 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 SH3RF2Q8TEC5 729 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ATG4AQ8WYN0 398 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 RAB17Q9H0T7 212 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 TMEM248Q9NWD8 314 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 DTLQ9NZJ0 730 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 SAE1Q9UBE0 346 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 DNPEPQ9ULA0 475 aa13.65□□□□□ -0.22
VTI1BP1-201ENST00000486325 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 BCLAF3A2AJT9 711 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 NDC80O14777 642 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 LINC01565O15544 149 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 RAD51CO43502 376 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 GREM1O60565 184 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 CLDN11O75508 207 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 CEBPBP17676 345 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 PTGIRP43119 386 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 KCNJ1P48048 391 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 NDST2P52849 883 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 DRG2P55039 364 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 CDH4P55283 916 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 YBEYP58557 167 aaPredicted RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 FAM133BQ5BKY9 247 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 STXBP5Q5T5C0 1151 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 TTC27Q6P3X3 843 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 C4orf22Q6V702 233 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 CHST9Q7L1S5 443 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 FAM217AQ8IXS0 508 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 UMODL1-AS1Q8N2C9 162 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 ITFG1Q8TB96 612 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 OTUB2Q96DC9 234 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 CCDC114Q96M63 670 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 S1PR5Q9H228 398 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 DOCK6Q96HP0 2047 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
VTI1BP1-201ENST00000486325 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 TTI1O43156 1089 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 MTSS1O43312 755 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 CYBBP04839 570 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 ACTN2P35609 894 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 GGCXP38435 758 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 ZXDBP98169 803 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 GBE1Q04446 702 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 SLC10A2Q12908 348 aaPredicted RBP13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 MPPE1Q53F39 396 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
VTI1BP1-201ENST00000486325 JAMLQ86YT9 394 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms