RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SETSIPP0DME0 302 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
MCF2L-226ENST00000486210 MEA1Q16626 185 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 HTR3DQ70Z44 454 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 CNGA4Q8IV77 575 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 BBC3Q96PG8 261 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-226ENST00000486210 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
MCF2L-226ENST00000486210 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 PDCL3Q9H2J4 239 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 CACNA2D2Q9NY47 1150 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 SUSD2Q9UGT4 822 aa18.34■□□□□ 0.53
MCF2L-226ENST00000486210 PIK3R2O00459 728 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 CYP1A1P04798 512 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-226ENST00000486210 CISD3P0C7P0 127 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 TYRP14679 529 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 CDH5P33151 784 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-226ENST00000486210 PLA2G4AP47712 749 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 TDRD12Q587J7 1177 aaKnown RBP18.33■□□□□ 0.52
MCF2L-226ENST00000486210 SDE2Q6IQ49 451 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 GLRX5Q86SX6 157 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 P2RY11Q96G91 374 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 CHP1Q99653 195 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 KLF16Q9BXK1 252 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-226ENST00000486210 IL21RQ9HBE5 538 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 PNPLA8Q9NP80 782 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 MARK1Q9P0L2 795 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 WDR35Q9P2L0 1181 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 IMPACTQ9P2X3 320 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 TJP2Q9UDY2 1190 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 PCOLCE2Q9UKZ9 415 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 SCML2Q9UQR0 700 aa18.33■□□□□ 0.52
MCF2L-226ENST00000486210 DDX3XO00571 662 aaKnown RBP eCLIP18.32■□□□□ 0.52
MCF2L-226ENST00000486210 NDUFS2O75306 463 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 TBX18O95935 607 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 TNFAIP3P21580 790 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 SLC8A3P57103 927 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 NOMO3P69849 1222 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 SYCP2LQ5T4T6 812 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 NAA35Q5VZE5 725 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 TPGS1Q6ZTW0 290 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 HNRNPLLQ8WVV9 542 aaKnown RBP18.32■□□□□ 0.52
MCF2L-226ENST00000486210 CPA5Q8WXQ8 436 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 DNASE2BQ8WZ79 361 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 FOXJ1Q92949 421 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 BBS2Q9BXC9 721 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 CYLDQ9NQC7 956 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 SEPT11Q9NVA2 429 aaKnown RBP18.32■□□□□ 0.52
MCF2L-226ENST00000486210 TOR4AQ9NXH8 423 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 RAXQ9Y2V3 346 aa18.32■□□□□ 0.52
MCF2L-226ENST00000486210 RALAP11233 206 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 UNGP13051 313 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 GNSP15586 552 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 CD6P30203 668 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 RPL34P49207 117 aaKnown RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 PSEN1P49768 467 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 KIF11P52732 1056 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 BNC1Q01954 994 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 PDCLQ13371 301 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 CLEC16AQ2KHT3 1053 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 PTPN20Q4JDL3 420 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 WDR45BQ5MNZ6 344 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 KIAA1324Q6UXG2 1013 aaKnown RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 TMEM35BQ8NCS4 154 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 SLC30A5Q8TAD4 765 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 BAHD1Q8TBE0 780 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 KCTD13Q8WZ19 329 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 CPXM1Q96SM3 734 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 CDK5RAP1Q96SZ6 601 aaKnown RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 SLC4A5Q9BY07 1137 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 WSB2Q9NYS7 404 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 TAS2R14Q9NYV8 317 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 DNMT3LQ9UJW3 386 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 APOBEC2Q9Y235 224 aaKnown RBP18.31■□□□□ 0.52
MCF2L-226ENST00000486210 IGSF10Q6WRI0 2623 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 TMEM131Q92545 1883 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 APC2O95996 2303 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 ACACAQ13085 2346 aa18.31■□□□□ 0.52
MCF2L-226ENST00000486210 A0A1B0GTW7 788 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 GFRA2O00451 464 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 LSM8O95777 96 aaKnown RBP18.3■□□□□ 0.52
MCF2L-226ENST00000486210 RARGP13631 454 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 LCP1P13796 627 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 EIF4A3P38919 411 aaKnown RBP18.3■□□□□ 0.52
MCF2L-226ENST00000486210 DGKGP49619 791 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 TKTL1P51854 596 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 ADIGQ0VDE8 80 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 TSR1Q2NL82 804 aaKnown RBP18.3■□□□□ 0.52
MCF2L-226ENST00000486210 C2CD6Q53TS8 623 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 C10orf120Q5SQS8 335 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 ZCCHC9Q8N567 271 aaKnown RBP18.3■□□□□ 0.52
MCF2L-226ENST00000486210 STK32AQ8WU08 396 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 TOE1Q96GM8 510 aaKnown RBP18.3■□□□□ 0.52
MCF2L-226ENST00000486210 HSFY1Q96LI6 401 aa18.3■□□□□ 0.52
MCF2L-226ENST00000486210 ULBP1Q9BZM6 244 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms