RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TUBP50607 506 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 FOXC1Q12948 553 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 TRIM61Q5EBN2 209 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 EOGTQ5NDL2 527 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 GRAMD4Q6IC98 578 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 GJB7Q6PEY0 223 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 Q6ZNB5 142 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CTAGE6Q86UF2 777 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 UNC93AQ86WB7 457 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 ZNF677Q86XU0 584 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 SLC41A1Q8IVJ1 513 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CTAGE4Q8IX94 777 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 SYCE1Q8N0S2 351 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 DEFB124Q8NES8 71 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 AGPAT1Q99943 283 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 NT5C1AQ9BXI3 368 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 POLMQ9NP87 494 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CYLDQ9NQC7 956 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 TLR8Q9NR97 1041 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 COMMD8Q9NX08 183 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CACNA2D2Q9NY47 1150 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CALCOCO1Q9P1Z2 691 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 TRIM10Q9UDY6 481 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 ANGPTL2Q9UKU9 493 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 WASF3Q9UPY6 502 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 PLXND1Q9Y4D7 1925 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 IGHV1OR15-9A0A0B4J2B8 117 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 ANKRD62A6NC57 917 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 DDX3XO00571 662 aaKnown RBP eCLIP9.78□□□□□ -0.842e-10■■■■□ 21.8
TMEM39A-208ENST00000486159 FOXD2O60548 495 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 STC2O76061 302 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 ALDH1A2O94788 518 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 MAOBP27338 520 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 NTSR1P30989 418 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 RAD23BP54727 409 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 HADHBP55084 474 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM193AP78312 1265 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 EFEMP1Q12805 493 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 ARHGAP44Q17R89 818 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 GEN1Q17RS7 908 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 C10orf120Q5SQS8 335 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 BTBD8Q5XKL5 378 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 RSRC2Q7L4I2 434 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 LPCAT2Q7L5N7 544 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 ARHGEF19Q8IW93 802 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 RHOT2Q8IXI1 618 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 PPM1KQ8N3J5 372 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 IPO4Q8TEX9 1081 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 TAF4BQ92750 862 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 OTUB2Q96DC9 234 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 HEXIM2Q96MH2 286 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 FBXO44Q9H4M3 255 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM124BQ9H5Z6 455 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 TMEM9BQ9NQ34 198 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 ARGLU1Q9NWB6 273 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 RASAL2Q9UJF2 1139 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 AJAP1Q9UKB5 411 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 PILRBQ9UKJ0 227 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 CYP8B1Q9UNU6 501 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 HYOU1Q9Y4L1 999 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 USP3Q9Y6I4 520 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 SPEGQ15772 3267 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 FRYQ5TBA9 3013 aa9.78□□□□□ -0.84
TMEM39A-208ENST00000486159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CACNG3O60359 315 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 RTN2O75298 545 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 MOCS3O95396 460 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 ATP1A1P05023 1023 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 P4HA1P13674 534 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 ENGP17813 658 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 MCM3P25205 808 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 NAP1L1P55209 391 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 YWHAEP62258 255 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 RPL6Q02878 288 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF252P-AS1Q0IIN9 211 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 FYB2Q5VWT5 728 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 TRIM72Q6ZMU5 477 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF572Q7Z3I7 529 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CHPFQ8IZ52 775 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CCDC26Q8TAB7 109 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 SORCS1Q8WY21 1168 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 RFFLQ8WZ73 363 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 DDX1Q92499 740 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 KREMEN1Q96MU8 473 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 DUSP16Q9BY84 665 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 NIF3L1Q9GZT8 377 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 ISCUQ9H1K1 167 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CYP3A43Q9HB55 503 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 CISHQ9NSE2 258 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 DNMT3LQ9UJW3 386 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 STARD13Q9Y3M8 1113 aa9.77□□□□□ -0.85
TMEM39A-208ENST00000486159 DUSP10Q9Y6W6 482 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms