RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 PDLIM1O00151 329 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SNAI1O95863 264 aaPredicted RBP18.01■□□□□ 0.47
TNXB-205ENST00000486148 MATKP42679 507 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 ERFP50548 548 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 TEDDM1Q5T9Z0 273 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 TP53INP2Q8IXH6 220 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 ARHGAP24Q8N264 748 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SCG3Q8WXD2 468 aaKnown RBP18.01■□□□□ 0.47
TNXB-205ENST00000486148 GOLGA2P5Q9HBQ8 144 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 DMAP1Q9NPF5 467 aaPredicted RBP18.01■□□□□ 0.47
TNXB-205ENST00000486148 COX16Q9P0S2 106 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SEPT10Q9P0V9 454 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 DNAJC16Q9Y2G8 782 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 KPNA7A9QM74 516 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SPECC1L-ADORA2AF8WAN1 911 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 PIRO00625 290 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 GPR32O75388 356 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SERPINA6P08185 405 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 MMP3P08254 477 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 IMPDH2P12268 514 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SMPD1P17405 629 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 PSMB4P28070 264 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 CES3Q6UWW8 571 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 GATA6Q92908 595 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 FAM149B1Q96BN6 582 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 DTNBP1Q96EV8 351 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 SYBUQ9NX95 663 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 PHF24Q9UPV7 400 aa18.01■□□□□ 0.47
TNXB-205ENST00000486148 PLIN3O60664 434 aa18■□□□□ 0.47
TNXB-205ENST00000486148 PRKCGP05129 697 aa18■□□□□ 0.47
TNXB-205ENST00000486148 TUBB3Q13509 450 aa18■□□□□ 0.47
TNXB-205ENST00000486148 OLIG2Q13516 323 aa18■□□□□ 0.47
TNXB-205ENST00000486148 MYBPC3Q14896 1274 aa18■□□□□ 0.47
TNXB-205ENST00000486148 PPM1JQ5JR12 505 aa18■□□□□ 0.47
TNXB-205ENST00000486148 SDCCAG8Q86SQ7 713 aaPredicted RBP18■□□□□ 0.47
TNXB-205ENST00000486148 SCUBE1Q8IWY4 988 aa18■□□□□ 0.47
TNXB-205ENST00000486148 THTPAQ9BU02 230 aa18■□□□□ 0.47
TNXB-205ENST00000486148 CREB3O43889 395 aa18■□□□□ 0.47
TNXB-205ENST00000486148 PGAM1P18669 254 aa18■□□□□ 0.47
TNXB-205ENST00000486148 ACADSBP45954 432 aa18■□□□□ 0.47
TNXB-205ENST00000486148 ADIGQ0VDE8 80 aa18■□□□□ 0.47
TNXB-205ENST00000486148 PCLAFQ15004 111 aa18■□□□□ 0.47
TNXB-205ENST00000486148 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
TNXB-205ENST00000486148 SLC25A52Q3SY17 297 aa18■□□□□ 0.47
TNXB-205ENST00000486148 DCAF6Q58WW2 860 aa18■□□□□ 0.47
TNXB-205ENST00000486148 PIGZQ86VD9 579 aa18■□□□□ 0.47
TNXB-205ENST00000486148 ULK2Q8IYT8 1036 aa18■□□□□ 0.47
TNXB-205ENST00000486148 GPRC5AQ8NFJ5 357 aa18■□□□□ 0.47
TNXB-205ENST00000486148 ACMSDQ8TDX5 336 aa18■□□□□ 0.47
TNXB-205ENST00000486148 RNF139Q8WU17 664 aa18■□□□□ 0.47
TNXB-205ENST00000486148 CDKL2Q92772 493 aa18■□□□□ 0.47
TNXB-205ENST00000486148 HSFY1Q96LI6 401 aa18■□□□□ 0.47
TNXB-205ENST00000486148 SNX25Q9H3E2 840 aa18■□□□□ 0.47
TNXB-205ENST00000486148 UBQLN1Q9UMX0 589 aaKnown RBP18■□□□□ 0.47
TNXB-205ENST00000486148 GLRA3O75311 464 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 TM7SF2O76062 418 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 ITGA2BP08514 1039 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 SLC1A6P48664 564 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 EFHC1Q5JVL4 640 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 STXBP5Q5T5C0 1151 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 CCNYQ8ND76 341 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 PIWIL2Q8TC59 973 aaKnown RBP17.99■□□□□ 0.47
TNXB-205ENST00000486148 PANX3Q96QZ0 392 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 SMIM28A0A1B0GU29 152 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 E2F8A0AVK6 867 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 MEI4A8MW99 385 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 OPHN1O60890 802 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 ERVK-10P10266 1014 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 MLH1P40692 756 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 SOX4Q06945 474 aaPredicted RBP17.99■□□□□ 0.47
TNXB-205ENST00000486148 RIPOR1Q6ZS17 1223 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 RBM12BQ8IXT5 1001 aaKnown RBP17.99■□□□□ 0.47
TNXB-205ENST00000486148 ZNF567Q8N184 647 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 SHKBP1Q8TBC3 707 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 PLEKHG4BQ96PX9 1271 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 EIF2B3Q9NR50 452 aaKnown RBP17.99■□□□□ 0.47
TNXB-205ENST00000486148 DNAAF2Q9NVR5 837 aaKnown RBP17.99■□□□□ 0.47
TNXB-205ENST00000486148 SLC7A8Q9UHI5 535 aa17.99■□□□□ 0.47
TNXB-205ENST00000486148 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 BEST1O76090 585 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 ARRB2P32121 409 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 CNPY1Q3B7I2 92 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 MAVSQ7Z434 540 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 NET1Q7Z628 596 aaPredicted RBP17.98■□□□□ 0.47
TNXB-205ENST00000486148 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 C10orf107Q8IVU9 208 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 PRDM12Q9H4Q4 367 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 RCOR3Q9P2K3 495 aaPredicted RBP17.98■□□□□ 0.47
TNXB-205ENST00000486148 CLDN5O00501 218 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 ADCY6O43306 1168 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 F7P08709 466 aaPredicted RBP17.98■□□□□ 0.47
TNXB-205ENST00000486148 C6orf222P0C671 652 aaPredicted RBP17.98■□□□□ 0.47
TNXB-205ENST00000486148 SKIP12755 728 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 GLUD2P49448 558 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 NDUFV1P49821 464 aa17.98■□□□□ 0.47
TNXB-205ENST00000486148 PDE1BQ01064 536 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms